RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 URB2Q14146 1524 aaKnown RBP2.68□□□□□ -1.98
SNX4-202ENST00000465505 PRG4Q92954 1404 aaPredicted RBP2.68□□□□□ -1.98
SNX4-202ENST00000465505 NUP210Q8TEM1 1887 aaPredicted RBP2.67□□□□□ -1.98
SNX4-202ENST00000465505 LAMC3Q9Y6N6 1575 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 IGKV3D-20A0A0C4DH25 116 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 LOC100130705A0A1B0GUX0 176 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 SRRM4A7MD48 611 aaKnown RBP2.67□□□□□ -1.98
SNX4-202ENST00000465505 PMS2P5A8MQ11 134 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 INMT-MINDY4F8WBC2 141 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 G3V3Q6 166 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 VCYO14598 125 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 CDC42EP2O14613 210 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 PLPP2O43688 288 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 EEDO75530 441 aaKnown RBP2.67□□□□□ -1.98
SNX4-202ENST00000465505 CDRT1O95170 752 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 CA1P00915 261 aaPredicted RBP2.67□□□□□ -1.98
SNX4-202ENST00000465505 PMP2P02689 132 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 TTRP02766 147 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 PVRP15151 417 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 RPL35AP18077 110 aaKnown RBP2.67□□□□□ -1.98
SNX4-202ENST00000465505 CNTFRP26992 372 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 G6PCP35575 357 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 LHX2P50458 406 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 DLX1P56177 255 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 RAB38P57729 211 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 ARG2P78540 354 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 BTG2P78543 158 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 TGFBR3Q03167 851 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 SRYQ05066 204 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 SMAGPQ0VAQ4 97 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 ST3GAL4Q11206 333 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 PNRC1Q12796 327 aaPredicted RBP2.67□□□□□ -1.98
SNX4-202ENST00000465505 PPP1R1AQ13522 171 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 SIX1Q15475 284 aaPredicted RBP2.67□□□□□ -1.98
SNX4-202ENST00000465505 NRF1Q16656 503 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 TIMM50Q3ZCQ8 353 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 PRR30Q53SZ7 412 aaPredicted RBP2.67□□□□□ -1.98
SNX4-202ENST00000465505 FFAR4Q5NUL3 377 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 GLYATL3Q5SZD4 288 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 NXNL2Q5VZ03 156 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 HBMQ6B0K9 141 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 TRNP1Q6NT89 227 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 ZNF343Q6P1L6 599 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 ALKAL1Q6UXT8 129 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 APOOLQ6UXV4 268 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 FAM231DQ6ZW35 169 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 CMC1Q7Z7K0 106 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 IFNEQ86WN2 208 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 KRTCAP2Q8N6L1 136 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 ZNF433Q8N7K0 673 aaPredicted RBP2.67□□□□□ -1.98
SNX4-202ENST00000465505 ZNF615Q8N8J6 731 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 KLHDC9Q8NEP7 349 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 OR10D4PQ8NGN7 298 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 OR1B1Q8NGR6 318 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 OR2G3Q8NGZ4 309 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 THAP6Q8TBB0 222 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 GPR148Q8TDV2 347 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 GATAD1Q8WUU5 269 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 PP6455Q8WZ26 134 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 OR5P3Q8WZ94 311 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 BORCS7Q96B45 105 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 FGGYQ96C11 551 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 ZNF524Q96C55 264 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 PLEKHB2Q96CS7 222 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 TMEM101Q96IK0 257 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 TRIB3Q96RU7 358 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 CLCC1Q96S66 551 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 MCHR1Q99705 422 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 NKX3-1Q99801 234 aaPredicted RBP2.67□□□□□ -1.98
SNX4-202ENST00000465505 TMEM121Q9BTD3 319 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 ZNF471Q9BX82 626 aaPredicted RBP2.67□□□□□ -1.98
SNX4-202ENST00000465505 SEC11CQ9BY50 192 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 SLC25A39Q9BZJ4 359 aaPredicted RBP2.67□□□□□ -1.98
SNX4-202ENST00000465505 C3orf14Q9HBI5 128 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 SLC25A19Q9HC21 320 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 SH2D2AQ9NP31 389 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 PRTFDC1Q9NRG1 225 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 CISHQ9NSE2 258 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 ACER3Q9NUN7 267 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 HRASLS2Q9NWW9 162 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 TAS2R5Q9NYW4 299 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 OR5AC2Q9NZP5 309 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 COMMD3Q9UBI1 195 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 LSM7Q9UK45 103 aaKnown RBP2.67□□□□□ -1.98
SNX4-202ENST00000465505 SCML2Q9UQR0 700 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 WDR83OSQ9Y284 106 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 RNF11Q9Y3C5 154 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 ZNF780BQ9Y6R6 833 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 RLFQ13129 1914 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 SBF2Q86WG5 1849 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 MARF1Q9Y4F3 1742 aaKnown RBP2.67□□□□□ -1.98
SNX4-202ENST00000465505 RIMBP3CA6NJZ7 1639 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 RIMBP3BA6NNM3 1639 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 HMGXB3Q12766 1538 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 DYSFO75923 2080 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 TMEM131Q92545 1883 aa2.67□□□□□ -1.98
SNX4-202ENST00000465505 CCDC88CQ9P219 2028 aa2.66□□□□□ -1.98
SNX4-202ENST00000465505 DAPL1A0PJW8 107 aa2.66□□□□□ -1.98
SNX4-202ENST00000465505 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.66□□□□□ -1.98
SNX4-202ENST00000465505 H7BYZ3 331 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms