RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	FLVCR1-AS1	Q8TAF5	88 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	GPR151	Q8TDV0	419 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ZNF431	Q8TF32	576 aa	Predicted RBP	3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	NPRL2	Q8WTW4	380 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	SKA2	Q8WVK7	121 aa	Predicted RBP	3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	TMEM239	Q8WW34	195 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	RPUSD4	Q96CM3	377 aa	Known RBP	3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	RCN3	Q96D15	328 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ASB9	Q96DX5	294 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	OR8B4	Q96RC9	309 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	S100A13	Q99584	98 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	SOST	Q9BQB4	213 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	CHCHD5	Q9BSY4	110 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	THTPA	Q9BU02	230 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ALG12	Q9BV10	488 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ACTR3C	Q9C0K3	210 aa	Predicted RBP	3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	TLNRD1	Q9H1K6	362 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	PLEKHJ1	Q9NW61	149 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	SLC2A8	Q9NY64	477 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	AHSP	Q9NZD4	102 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	IGLV4-3	A0A075B6K6	122 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	IGKV1-8	A0A0C4DH67	115 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	TMEM269	A0A1B0GVZ9	245 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278		A0A1W2PP18	115 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278		M0R233	179 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	SLC17A3	O00476	420 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	RAB29	O14966	203 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	SLC31A1	O15431	190 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	TCF21	O43680	179 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	HPGDS	O60760	199 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	EED	O75530	441 aa	Known RBP	3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	OR6A2	O95222	327 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	APOC3	P02656	99 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	CD2	P06729	351 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	CRYGB	P07316	175 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	NMB	P08949	121 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	LINC00032	P0C843	101 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	NELFE	P18615	380 aa	Known RBP	3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	PCMT1	P22061	227 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ZBTB25	P24278	435 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	HTR2C	P28335	458 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	AKT2	P31751	481 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	KDELR2	P33947	212 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	CEACAM3	P40198	252 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	BDKRB1	P46663	353 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	CSNK1A1	P48729	337 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	DIO3	P55073	304 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	MLF1	P58340	268 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	HERV-K104	P63124	156 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	PRDX1	Q06830	199 aa	Known RBP	3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	PEA15	Q15121	130 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ECSCR	Q19T08	205 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ADPRM	Q3LIE5	342 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	MORN2	Q502X0	79 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ATP6AP1L	Q52LC2	224 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	OCIAD2	Q56VL3	154 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	AKR1C8P	Q5T2L2	129 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	SAMD13	Q5VXD3	122 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	TMEM42	Q69YG0	159 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ADNP2	Q6IQ32	1131 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	WDR74	Q6RFH5	385 aa	Predicted RBP	3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	FAM131A	Q6UXB0	335 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ZNF730	Q6ZMV8	503 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	WDR88	Q6ZMY6	472 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	DPY19L4	Q7Z388	723 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	H1FOO	Q8IZA3	346 aa	Predicted RBP	3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	LINC01555	Q8NAE3	123 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	UBAC2	Q8NBM4	344 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	OR52B4	Q8NGK2	314 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	OR5AR1	Q8NGP9	310 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	OR2A1	Q8NGT9	310 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	OR6K3	Q8NGY3	331 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	MCFD2	Q8NI22	146 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	KCNG3	Q8TAE7	436 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	C8orf46	Q8TAG6	207 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	PCNP	Q8WW12	178 aa	Known RBP	3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	RORB	Q92753	470 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	NEIL2	Q969S2	332 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	PTH2	Q96A98	100 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ISOC2	Q96AB3	205 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	MRPS24	Q96EL2	167 aa	Known RBP	3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	TEX37	Q96LM6	180 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	OR2M4	Q96R27	311 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	OR7D2	Q96RA2	312 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	SDHC	Q99643	169 aa	Predicted RBP	3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	EFCAB11	Q9BUY7	163 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	RAB11FIP5	Q9BXF6	653 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	SNHG12	Q9BXW3	62 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	CHRNA10	Q9GZZ6	450 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	LHX9	Q9NQ69	397 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	SMCO4	Q9NRQ5	59 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	SPANXC	Q9NY87	97 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	VPS29	Q9UBQ0	182 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ZNF391	Q9UJN7	358 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	MRTO4	Q9UKD2	239 aa	Known RBP	3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	KCNK6	Q9Y257	313 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	MRPS33	Q9Y291	106 aa	Known RBP	3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ASF1A	Q9Y294	204 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	HEBP2	Q9Y5Z4	205 aa		3.95	□□□□□ -1.78
CACNA1C-223	ENST00000465278	DNAH9	Q9NYC9	4486 aa		3.95	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms