RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 BRICD5Q6PL45 260 aa14.06□□□□□ -0.16
EXOSC3-203ENST00000465229 TEX261Q6UWH6 196 aa14.06□□□□□ -0.16
EXOSC3-203ENST00000465229 FAM216BQ8N7L0 139 aa14.06□□□□□ -0.16
EXOSC3-203ENST00000465229 ZNRF1Q8ND25 227 aa14.06□□□□□ -0.16
EXOSC3-203ENST00000465229 FOXC2Q99958 501 aa14.06□□□□□ -0.16
EXOSC3-203ENST00000465229 ZNF2Q9BSG1 426 aaPredicted RBP14.06□□□□□ -0.16
EXOSC3-203ENST00000465229 ZNF665Q9H7R5 613 aa14.06□□□□□ -0.16
EXOSC3-203ENST00000465229 U3KQ87 197 aa14.06□□□□□ -0.16
EXOSC3-203ENST00000465229 CREBBPQ92793 2442 aa14.06□□□□□ -0.16
EXOSC3-203ENST00000465229 SLC33A1O00400 549 aaPredicted RBP14.05□□□□□ -0.16
EXOSC3-203ENST00000465229 SIGLEC5O15389 551 aa14.05□□□□□ -0.16
EXOSC3-203ENST00000465229 ADAM20O43506 726 aa14.05□□□□□ -0.16
EXOSC3-203ENST00000465229 ZNF737O75373 536 aa14.05□□□□□ -0.16
EXOSC3-203ENST00000465229 NAPSAO96009 420 aa14.05□□□□□ -0.16
EXOSC3-203ENST00000465229 SELLP14151 372 aa14.05□□□□□ -0.16
EXOSC3-203ENST00000465229 SUPT4H1P63272 117 aaKnown RBP14.05□□□□□ -0.16
EXOSC3-203ENST00000465229 ZNF561Q8N587 486 aa14.05□□□□□ -0.16
EXOSC3-203ENST00000465229 SUMF2Q8NBJ7 301 aa14.05□□□□□ -0.16
EXOSC3-203ENST00000465229 COQ8AQ8NI60 647 aa14.05□□□□□ -0.16
EXOSC3-203ENST00000465229 SHARPINQ9H0F6 387 aa14.05□□□□□ -0.16
EXOSC3-203ENST00000465229 RAB18Q9NP72 206 aa14.05□□□□□ -0.16
EXOSC3-203ENST00000465229 CTSZQ9UBR2 303 aa14.05□□□□□ -0.16
EXOSC3-203ENST00000465229 TRBV6-6A0A0A6YYG2 114 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 L7N2F9 121 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 FCN3O75636 299 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 WNT2P09544 360 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 SLC25A4P12235 298 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 RPS2P15880 293 aaKnown RBP14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 RPA2P15927 270 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 CXCL2P19875 107 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 S100A1P23297 94 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 UCP3P55916 312 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 CYCSP99999 105 aaKnown RBP14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 SHEQ5VZ18 495 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 SLC7A5P1Q8MH63 180 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 OR8H1Q8NGG4 311 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 CASTOR1Q8WTX7 329 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 MIOXQ9UGB7 285 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 IGHV4-61A0A0C4DH41 118 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 NKX6-3A6NJ46 265 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 K7N7A8 449 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 HSPB6O14558 160 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 PGAM2P15259 253 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 OPCMLQ14982 345 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 ZNF680Q8NEM1 530 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 DYRK2Q92630 601 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 SNX22Q96L94 193 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 DPCDQ9BVM2 203 aaPredicted RBP14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 PATZ1Q9HBE1 687 aaKnown RBP14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 COMMD9Q9P000 198 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 PCDHB10Q9UN67 800 aa14.04□□□□□ -0.16
EXOSC3-203ENST00000465229 AKAP9Q99996 3911 aa14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 ITPR3Q14573 2671 aa14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 TRAV14DV4A0A0A6YYC5 116 aa14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 TSC22D2O75157 780 aa14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 IFNA7P01567 189 aa14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 SLC25A16P16260 332 aa14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 S100A11P31949 105 aa14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 GLP1RP43220 463 aa14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 OR3A1P47881 315 aa14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 LMO4P61968 165 aa14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 BAMBIQ13145 260 aa14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 RBM39Q14498 530 aaKnown RBP14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 PAN3Q58A45 887 aaKnown RBP14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 ZNF841Q6ZN19 808 aa14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 CLDND2Q8NHS1 167 aa14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 PDCD10Q9BUL8 212 aa14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 NMES1Q9C002 83 aa14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 Q9N2K0 584 aa14.03□□□□□ -0.16
EXOSC3-203ENST00000465229 F5H0A9 414 aaPredicted RBP14.02□□□□□ -0.16
EXOSC3-203ENST00000465229 DVL1O14640 695 aa14.02□□□□□ -0.16
EXOSC3-203ENST00000465229 MPC2O95563 127 aa14.02□□□□□ -0.16
EXOSC3-203ENST00000465229 TK1P04183 234 aa14.02□□□□□ -0.16
EXOSC3-203ENST00000465229 GSG1LQ6UXU4 331 aa14.02□□□□□ -0.16
EXOSC3-203ENST00000465229 Q6ZPA2 131 aa14.02□□□□□ -0.16
EXOSC3-203ENST00000465229 KCTD9Q7L273 389 aa14.02□□□□□ -0.16
EXOSC3-203ENST00000465229 FGFRL1Q8N441 504 aa14.02□□□□□ -0.16
EXOSC3-203ENST00000465229 MOB3AQ96BX8 217 aa14.02□□□□□ -0.16
EXOSC3-203ENST00000465229 NEIL1Q96FI4 390 aaPredicted RBP14.02□□□□□ -0.16
EXOSC3-203ENST00000465229 Q96MF0 132 aa14.02□□□□□ -0.16
EXOSC3-203ENST00000465229 FXYD6-FXYD2A0A087WZ82 144 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 A0A096LNT2 108 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 KIR2DS1A0A191URI9 304 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 CRYM-AS1A6NIL9 109 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 NDUFB3O43676 98 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 IGHV2-5P01817 119 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 CTXN2P0C2S0 81 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 ZNF728P0DKX0 622 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 PI3P19957 117 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 KIR2DS4P43632 304 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 KIR2DS1Q14954 304 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 TMUB2Q71RG4 321 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 SGPP2Q8IWX5 399 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 WFDC11Q8NEX6 87 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 OR8B3Q8NGG8 313 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 OR8B2Q96RD0 313 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 FXYD6Q9H0Q3 95 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 FAM234AQ9H0X4 552 aa14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 CHMP1AQ9HD42 196 aaPredicted RBP14.01□□□□□ -0.17
EXOSC3-203ENST00000465229 SLC25A10Q9UBX3 287 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms