RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 PRRX1P54821 245 aa14.24□□□□□ -0.13
CPSF4-209ENST00000465132 ACTBP60709 375 aa14.24□□□□□ -0.13
CPSF4-209ENST00000465132 SSBP1Q04837 148 aaKnown RBP14.24□□□□□ -0.13
CPSF4-209ENST00000465132 TREML4Q6UXN2 200 aa14.24□□□□□ -0.13
CPSF4-209ENST00000465132 OR4A4PQ8NGN8 299 aa14.24□□□□□ -0.13
CPSF4-209ENST00000465132 TAF15Q92804 592 aaKnown RBP eCLIP14.24□□□□□ -0.13
CPSF4-209ENST00000465132 MIXL1Q9H2W2 232 aa14.24□□□□□ -0.13
CPSF4-209ENST00000465132 PKD1L1Q8TDX9 2849 aa14.24□□□□□ -0.13
CPSF4-209ENST00000465132 C12orf77C9JDV5 145 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 F2RL2O00254 374 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 TOR1AO14656 332 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 MMP9P14780 707 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 RCC1P18754 421 aaPredicted RBP14.23□□□□□ -0.13
CPSF4-209ENST00000465132 ZBTB25P24278 435 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 UBE2E1P51965 193 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 DLX6P56179 175 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 HLA-DRB3P79483 266 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 HMGN3Q15651 99 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 FAM131AQ6UXB0 335 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 SNX29P2Q8IUI4 249 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 IZUMO1Q8IYV9 350 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 OR6Q1Q8NGQ2 317 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 ZNF596Q8TC21 504 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 TNFRSF14Q92956 283 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 ST6GALNAC5Q9BVH7 336 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 TMEM133Q9H2Q1 129 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 GNG12Q9UBI6 72 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 JPT1Q9UK76 154 aa14.23□□□□□ -0.13
CPSF4-209ENST00000465132 SDCBPO00560 298 aaPredicted RBP14.22□□□□□ -0.13
CPSF4-209ENST00000465132 CTDSPLO15194 276 aa14.22□□□□□ -0.13
CPSF4-209ENST00000465132 HSPA12AO43301 675 aa14.22□□□□□ -0.13
CPSF4-209ENST00000465132 HLA-DQB1P01920 261 aa14.22□□□□□ -0.13
CPSF4-209ENST00000465132 HBZP02008 142 aa14.22□□□□□ -0.13
CPSF4-209ENST00000465132 LGALS4P56470 323 aa14.22□□□□□ -0.13
CPSF4-209ENST00000465132 ARPC4P59998 168 aa14.22□□□□□ -0.13
CPSF4-209ENST00000465132 C17orf58Q2M2W7 97 aa14.22□□□□□ -0.13
CPSF4-209ENST00000465132 OLFML2AQ68BL7 652 aa14.22□□□□□ -0.13
CPSF4-209ENST00000465132 TCF23Q7RTU1 214 aa14.22□□□□□ -0.13
CPSF4-209ENST00000465132 PRR18Q8N4B5 295 aa14.22□□□□□ -0.13
CPSF4-209ENST00000465132 NUDCD2Q8WVJ2 157 aa14.22□□□□□ -0.13
CPSF4-209ENST00000465132 CLEC7AQ9BXN2 247 aa14.22□□□□□ -0.13
CPSF4-209ENST00000465132 GHITMQ9H3K2 345 aa14.22□□□□□ -0.13
CPSF4-209ENST00000465132 TAS2R8Q9NYW2 309 aa14.22□□□□□ -0.13
CPSF4-209ENST00000465132 A0A087X0M5 115 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 TRAV40A0A0B4J280 105 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 A0A1B0GX30 115 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 C15orf65H3BRN8 121 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 GABARAPH6UMI1 98 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 FABP7O15540 132 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 RBBP9O75884 186 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 MDKP21741 143 aaPredicted RBP14.21□□□□□ -0.13
CPSF4-209ENST00000465132 NFYBP25208 207 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 SSTR5P35346 364 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 ETV6P41212 452 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 TAS2R46P59540 309 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 ZNF45Q02386 682 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 MIDNQ504T8 468 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 C16orf87Q6PH81 154 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 HOGA1Q86XE5 327 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 Q8N7P7 452 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 C8orf31Q8N9H6 132 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 BEST4Q8NFU0 473 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 OR10J5Q8NHC4 309 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 RFESDQ8TAC1 157 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 IL1F10Q8WWZ1 152 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 EDARADDQ8WWZ3 215 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 S100ZQ8WXG8 99 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 KIRREL1Q96J84 757 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 TBX15Q96SF7 602 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 HDHD3Q9BSH5 251 aaPredicted RBP14.21□□□□□ -0.13
CPSF4-209ENST00000465132 OR2S2Q9NQN1 319 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 SIRT7Q9NRC8 400 aa14.21□□□□□ -0.13
CPSF4-209ENST00000465132 AMMECR1Q9Y4X0 333 aaPredicted RBP14.21□□□□□ -0.13
CPSF4-209ENST00000465132 MDFIC2A0A1B0GVS7 189 aa14.2□□□□□ -0.14
CPSF4-209ENST00000465132 IL3RAP26951 378 aa14.2□□□□□ -0.14
CPSF4-209ENST00000465132 CD34P28906 385 aa14.2□□□□□ -0.14
CPSF4-209ENST00000465132 RCVRNP35243 200 aa14.2□□□□□ -0.14
CPSF4-209ENST00000465132 CEACAM3P40198 252 aa14.2□□□□□ -0.14
CPSF4-209ENST00000465132 ACTBL2Q562R1 376 aa14.2□□□□□ -0.14
CPSF4-209ENST00000465132 LY6G6FQ5SQ64 297 aa14.2□□□□□ -0.14
CPSF4-209ENST00000465132 PRAMEF5Q5TYX0 476 aa14.2□□□□□ -0.14
CPSF4-209ENST00000465132 CCDC190Q86UF4 302 aa14.2□□□□□ -0.14
CPSF4-209ENST00000465132 ABHD12Q8N2K0 398 aa14.2□□□□□ -0.14
CPSF4-209ENST00000465132 OR11H6Q8NGC7 330 aa14.2□□□□□ -0.14
CPSF4-209ENST00000465132 OR9G1Q8NH87 305 aa14.2□□□□□ -0.14
CPSF4-209ENST00000465132 GPX8Q8TED1 209 aa14.2□□□□□ -0.14
CPSF4-209ENST00000465132 LHX4Q969G2 390 aa14.2□□□□□ -0.14
CPSF4-209ENST00000465132 ZNF107Q9UII5 783 aaPredicted RBP14.2□□□□□ -0.14
CPSF4-209ENST00000465132 ANXA10Q9UJ72 324 aa14.2□□□□□ -0.14
CPSF4-209ENST00000465132 MMP24Q9Y5R2 645 aa14.2□□□□□ -0.14
CPSF4-209ENST00000465132 TRAV39A0A0B4J263 110 aa14.19□□□□□ -0.14
CPSF4-209ENST00000465132 IGHV1-69DA0A0B4J2H0 117 aa14.19□□□□□ -0.14
CPSF4-209ENST00000465132 HOXA3O43365 443 aaPredicted RBP14.19□□□□□ -0.14
CPSF4-209ENST00000465132 IGHV1-69P01742 117 aa14.19□□□□□ -0.14
CPSF4-209ENST00000465132 TBPP20226 339 aa14.19□□□□□ -0.14
CPSF4-209ENST00000465132 OMGP23515 440 aa14.19□□□□□ -0.14
CPSF4-209ENST00000465132 OR3A3P47888 321 aa14.19□□□□□ -0.14
CPSF4-209ENST00000465132 ARHGDIBP52566 201 aa14.19□□□□□ -0.14
CPSF4-209ENST00000465132 DEFA6Q01524 100 aa14.19□□□□□ -0.14
CPSF4-209ENST00000465132 DEFB112Q30KQ8 113 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms