RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 OR6C3Q9NZP0 311 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 OR2W1Q9Y3N9 320 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 CD300LBA8K4G0 201 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 FAM90A26D6RGX4 464 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 SCRG1O75711 98 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 TIAF1O95411 115 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 PSG2P11465 335 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 B4GALT1P15291 398 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 TUBG1P23258 451 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 PSMB3P49720 205 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 IDH3GP51553 393 aaPredicted RBP6.22□□□□□ -1.41
USP48-206ENST00000464577 ERVFC1-1P60608 527 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 RAC3P60763 192 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 ERVS71-1P61550 626 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 LCN2P80188 198 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 PAX5Q02548 391 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 C1orf194Q5T5A4 169 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 RIPPLY2Q5TAB7 128 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 COLCA1Q6ZS62 124 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 C17orf78Q8N4C9 275 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 GBGT1Q8N5D6 347 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 OR2T10Q8NGZ9 312 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 MRPL30Q8TCC3 161 aaKnown RBP6.22□□□□□ -1.41
USP48-206ENST00000464577 R3HDM4Q96D70 268 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 FOXB1Q99853 325 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 PCGF1Q9BSM1 259 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 SNHG12Q9BXW3 62 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 SLC39A9Q9NUM3 307 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 DCAF16Q9NXF7 216 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 CACNG5Q9UF02 275 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 SHANK1Q9Y566 2161 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 C5orf42Q9H799 3197 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 SEC16AO15027 2179 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 LOC102723996A0A087X1L8 192 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 CTXND1A0A1B0GTU2 59 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 LRRC3CA6NJW4 275 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 TMEM210A6NLX4 147 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 M0R143 59 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 DEGS1O15121 323 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 TNFSF12O43508 249 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 IGKV1-39P01597 117 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 MBP02144 154 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 IGKV1D-39P04432 117 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 JMJD7P0C870 316 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 IAPPP10997 89 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 FGF5P12034 268 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 PCOLCEQ15113 449 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 KCNIP4Q6PIL6 250 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 Q6ZRM9 215 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 MKXQ8IYA7 352 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 NECAP1Q8NC96 275 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 CLDN23Q96B33 292 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 OR4C12Q96R67 309 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 OR6C1Q96RD1 312 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 PARLQ9H300 379 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 PROK2Q9HC23 129 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 SH2D2AQ9NP31 389 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 RARRES3Q9UL19 164 aa6.21□□□□□ -1.41
USP48-206ENST00000464577 TNRC6BQ9UPQ9 1833 aaKnown RBP6.21□□□□□ -1.42
USP48-206ENST00000464577 LAMA3Q16787 3333 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 TRANK1O15050 2925 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 A0A1W2PPQ1 181 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 ZNF716A6NP11 495 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 M0QZK8 103 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 IGKV1-5P01602 117 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 GYPAP02724 150 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 MMP7P09237 267 aaPredicted RBP6.21□□□□□ -1.42
USP48-206ENST00000464577 OR4A8P0C604 315 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 CD99P14209 185 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 TDGF1P3P51864 188 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 CNN1P51911 297 aaKnown RBP6.21□□□□□ -1.42
USP48-206ENST00000464577 ELLP55199 621 aaPredicted RBP6.21□□□□□ -1.42
USP48-206ENST00000464577 RELQ04864 619 aaPredicted RBP6.21□□□□□ -1.42
USP48-206ENST00000464577 SLC38A11Q08AI6 406 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 ATP6V1FQ16864 119 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 NRN1LQ496H8 165 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 TMEM14EPQ6UXP3 125 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 AAED1Q7RTV5 226 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 MRPL41Q8IXM3 137 aaKnown RBP6.21□□□□□ -1.42
USP48-206ENST00000464577 RPP25LQ8N5L8 163 aaKnown RBP6.21□□□□□ -1.42
USP48-206ENST00000464577 OR10V1Q8NGI7 309 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 OR51H1Q8NH63 302 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 OR10J5Q8NHC4 309 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 NEK7Q8TDX7 302 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 KCNE4Q8WWG9 221 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 RPUSD4Q96CM3 377 aaKnown RBP6.21□□□□□ -1.42
USP48-206ENST00000464577 IMMP2LQ96T52 175 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 ELOVL1Q9BW60 279 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 FGF23Q9GZV9 251 aaPredicted RBP6.21□□□□□ -1.42
USP48-206ENST00000464577 FKBP11Q9NYL4 201 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 FUT9Q9Y231 359 aa6.21□□□□□ -1.42
USP48-206ENST00000464577 KIAA1549Q9HCM3 1950 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 UBE2L5PA0A1B0GUS4 154 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 TRAPPC2LH3BP13 241 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.2□□□□□ -1.42
USP48-206ENST00000464577 IGKV1D-33P01593 117 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 IGKV1-33P01594 117 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 CRYABP02511 175 aaKnown RBP6.2□□□□□ -1.42
USP48-206ENST00000464577 PATE4P0C8F1 98 aa6.2□□□□□ -1.42
USP48-206ENST00000464577 CCL3P10147 92 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms