RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 CASTOR1Q8WTX7 329 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 TSEN15Q8WW01 171 aaKnown RBP11.11□□□□□ -0.63
SMC1A-204ENST00000463684 PELI1Q96FA3 418 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 MRPL48Q96GC5 212 aaKnown RBP11.11□□□□□ -0.63
SMC1A-204ENST00000463684 RITA1Q96K30 269 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 S100A13Q99584 98 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 TMED9Q9BVK6 235 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 TRAPPC2LQ9UL33 140 aa11.11□□□□□ -0.63
SMC1A-204ENST00000463684 C12orf77C9JDV5 145 aa11.1□□□□□ -0.63
SMC1A-204ENST00000463684 H0Y980 276 aa11.1□□□□□ -0.63
SMC1A-204ENST00000463684 GEMIN2O14893 280 aaKnown RBP11.1□□□□□ -0.63
SMC1A-204ENST00000463684 SOX15O60248 233 aa11.1□□□□□ -0.63
SMC1A-204ENST00000463684 CDRT1O95170 752 aa11.1□□□□□ -0.63
SMC1A-204ENST00000463684 IGHV3-11P01762 117 aa11.1□□□□□ -0.63
SMC1A-204ENST00000463684 T-ENOLP0DO92 83 aa11.1□□□□□ -0.63
SMC1A-204ENST00000463684 NHLRC3Q5JS37 347 aa11.1□□□□□ -0.63
SMC1A-204ENST00000463684 SYT6Q5T7P8 510 aaPredicted RBP11.1□□□□□ -0.63
SMC1A-204ENST00000463684 ZNF660Q6AZW8 331 aaPredicted RBP11.1□□□□□ -0.63
SMC1A-204ENST00000463684 GTSCR1Q86UQ5 136 aa11.1□□□□□ -0.63
SMC1A-204ENST00000463684 OR5AK2Q8NH90 309 aa11.1□□□□□ -0.63
SMC1A-204ENST00000463684 C4orf36Q96KX1 117 aa11.1□□□□□ -0.63
SMC1A-204ENST00000463684 MYCBPQ99417 103 aaPredicted RBP11.1□□□□□ -0.63
SMC1A-204ENST00000463684 RNF150Q9ULK6 438 aa11.1□□□□□ -0.63
SMC1A-204ENST00000463684 A3GALT2U3KPV4 340 aa11.1□□□□□ -0.63
SMC1A-204ENST00000463684 TMEM212A6NML5 194 aa11.09□□□□□ -0.63
SMC1A-204ENST00000463684 POLR2IP36954 125 aaKnown RBP11.09□□□□□ -0.63
SMC1A-204ENST00000463684 CRIP2P52943 208 aaPredicted RBP11.09□□□□□ -0.63
SMC1A-204ENST00000463684 GNGT1P63211 74 aa11.09□□□□□ -0.63
SMC1A-204ENST00000463684 RAB40BQ12829 278 aa11.09□□□□□ -0.63
SMC1A-204ENST00000463684 MPV17LQ2QL34 196 aa11.09□□□□□ -0.63
SMC1A-204ENST00000463684 C6orf183Q5T699 404 aa11.09□□□□□ -0.63
SMC1A-204ENST00000463684 ACBD7Q8N6N7 88 aa11.09□□□□□ -0.63
SMC1A-204ENST00000463684 NPBQ8NG41 125 aa11.09□□□□□ -0.63
SMC1A-204ENST00000463684 ABHD5Q8WTS1 349 aa11.09□□□□□ -0.63
SMC1A-204ENST00000463684 MS4A10Q96PG2 267 aa11.09□□□□□ -0.63
SMC1A-204ENST00000463684 CIB1Q99828 191 aa11.09□□□□□ -0.63
SMC1A-204ENST00000463684 PAK1IP1Q9NWT1 392 aaPredicted RBP11.09□□□□□ -0.63
SMC1A-204ENST00000463684 MCRIP1C9JLW8 97 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 J3QRE1 110 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 HBZP02008 142 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 SERPINA2P20848 420 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 TPPP2P59282 170 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 PLGLAQ15195 96 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 C19orf54Q5BKX5 351 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 TRAT1Q6PIZ9 186 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 OR51A2Q8NGJ7 313 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 OR4K15Q8NH41 348 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 TRUB1Q8WWH5 349 aaKnown RBP11.08□□□□□ -0.64
SMC1A-204ENST00000463684 RHOVQ96L33 236 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 NABP2Q9BQ15 211 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 JAM3Q9BX67 310 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 OR2S2Q9NQN1 319 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 IL36GQ9NZH8 169 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 FBXO7Q9Y3I1 522 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 NUBP2Q9Y5Y2 271 aa11.08□□□□□ -0.64
SMC1A-204ENST00000463684 PLECQ15149 4684 aaKnown RBP11.07□□□□□ -0.64
SMC1A-204ENST00000463684 ZNF780AO75290 641 aaPredicted RBP11.07□□□□□ -0.64
SMC1A-204ENST00000463684 NDUFA3O95167 84 aa11.07□□□□□ -0.64
SMC1A-204ENST00000463684 ZP3P21754 424 aa11.07□□□□□ -0.64
SMC1A-204ENST00000463684 CX3CL1P78423 397 aa11.07□□□□□ -0.64
SMC1A-204ENST00000463684 ATP6AP1Q15904 470 aa11.07□□□□□ -0.64
SMC1A-204ENST00000463684 LRRC36Q1X8D7 754 aa11.07□□□□□ -0.64
SMC1A-204ENST00000463684 MORN2Q502X0 79 aa11.07□□□□□ -0.64
SMC1A-204ENST00000463684 ACTBL2Q562R1 376 aa11.07□□□□□ -0.64
SMC1A-204ENST00000463684 ZNF529Q6P280 563 aa11.07□□□□□ -0.64
SMC1A-204ENST00000463684 OR1L1Q8NH94 360 aa11.07□□□□□ -0.64
SMC1A-204ENST00000463684 PDCD1LG2Q9BQ51 273 aa11.07□□□□□ -0.64
SMC1A-204ENST00000463684 MRPL20Q9BYC9 149 aaKnown RBP11.07□□□□□ -0.64
SMC1A-204ENST00000463684 GABARAPL1Q9H0R8 117 aa11.07□□□□□ -0.64
SMC1A-204ENST00000463684 SLA2Q9H6Q3 261 aa11.07□□□□□ -0.64
SMC1A-204ENST00000463684 SPACA1Q9HBV2 294 aa11.07□□□□□ -0.64
SMC1A-204ENST00000463684 RANGRFQ9HD47 186 aaPredicted RBP11.07□□□□□ -0.64
SMC1A-204ENST00000463684 IMPAD1Q9NX62 359 aa11.07□□□□□ -0.64
SMC1A-204ENST00000463684 POMPQ9Y244 141 aa11.07□□□□□ -0.64
SMC1A-204ENST00000463684 RBMY1BA6NDE4 496 aaKnown RBP11.06□□□□□ -0.64
SMC1A-204ENST00000463684 RBMY1EA6NEQ0 496 aaKnown RBP11.06□□□□□ -0.64
SMC1A-204ENST00000463684 RGS11O94810 467 aa11.06□□□□□ -0.64
SMC1A-204ENST00000463684 RBMY1DP0C7P1 496 aaKnown RBP11.06□□□□□ -0.64
SMC1A-204ENST00000463684 GTF2F2P13984 249 aa11.06□□□□□ -0.64
SMC1A-204ENST00000463684 ZNF93P35789 620 aaPredicted RBP11.06□□□□□ -0.64
SMC1A-204ENST00000463684 SOX2P48431 317 aa11.06□□□□□ -0.64
SMC1A-204ENST00000463684 NDPQ00604 133 aa11.06□□□□□ -0.64
SMC1A-204ENST00000463684 MRPL28Q13084 256 aaKnown RBP11.06□□□□□ -0.64
SMC1A-204ENST00000463684 AKIRIN2Q53H80 203 aa11.06□□□□□ -0.64
SMC1A-204ENST00000463684 LCN12Q6JVE5 192 aa11.06□□□□□ -0.64
SMC1A-204ENST00000463684 CD200R1LQ6Q8B3 271 aa11.06□□□□□ -0.64
SMC1A-204ENST00000463684 UNQ5815/PRO19632Q6UWF5 114 aa11.06□□□□□ -0.64
SMC1A-204ENST00000463684 LHFPL3Q86UP9 236 aa11.06□□□□□ -0.64
SMC1A-204ENST00000463684 PPP1R27Q86WC6 154 aa11.06□□□□□ -0.64
SMC1A-204ENST00000463684 ABHD14AQ9BUJ0 271 aa11.06□□□□□ -0.64
SMC1A-204ENST00000463684 ALG8Q9BVK2 526 aa11.06□□□□□ -0.64
SMC1A-204ENST00000463684 HIPK2Q9H2X6 1198 aa11.06□□□□□ -0.64
SMC1A-204ENST00000463684 RETNQ9HD89 108 aa11.06□□□□□ -0.64
SMC1A-204ENST00000463684 ETAA1Q9NY74 926 aa11.06□□□□□ -0.64
SMC1A-204ENST00000463684 TAS2R4Q9NYW5 299 aa11.06□□□□□ -0.64
SMC1A-204ENST00000463684 CNOT2Q9NZN8 540 aaKnown RBP11.06□□□□□ -0.64
SMC1A-204ENST00000463684 SNTNA6NMZ2 147 aa11.05□□□□□ -0.64
SMC1A-204ENST00000463684 GYG2O15488 501 aa11.05□□□□□ -0.64
SMC1A-204ENST00000463684 TRGV3P03979 118 aa11.05□□□□□ -0.64
SMC1A-204ENST00000463684 CD2P06729 351 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms