RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 FABP9Q0Z7S8 132 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 VAX1Q5SQQ9 334 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 TMEM268Q5VZI3 342 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 PLCXD3Q63HM9 321 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 ASPHD2Q6ICH7 369 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 FIP1L1Q6UN15 594 aaKnown RBP6.55□□□□□ -1.36
USP4-207ENST00000462673 RBMS3Q6XE24 437 aaKnown RBP6.55□□□□□ -1.36
USP4-207ENST00000462673 Q6ZR03 302 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 Q6ZRG5 221 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 TEX29Q8N6K0 151 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 CHST4Q8NCG5 386 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 OR10AD1Q8NGE0 317 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 OR14K1Q8NGZ2 314 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 Q8TCH9 128 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 ITLN1Q8WWA0 313 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 OR5P3Q8WZ94 311 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 SPSB1Q96BD6 273 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 RAB39BQ96DA2 213 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 BORCS8Q96FH0 119 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 KIRREL1Q96J84 757 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 C2orf50Q96LR7 162 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 SLC5A7Q9GZV3 580 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 TAF9BQ9HBM6 251 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 MIOXQ9UGB7 285 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 RHBDD3Q9Y3P4 386 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 PPIAL4AQ9Y536 164 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 DMRT1Q9Y5R6 373 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 CADP27708 2225 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 APCP25054 2843 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 LRBAP50851 2863 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 A0A1W2PPH5 198 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 LRP5LA4QPB2 252 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 CEACAM18A8MTB9 384 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 ZNF732B4DXR9 585 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 FAM157AC9JC47 383 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 H0YL77 283 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 H3BSH0 61 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 AP4M1O00189 453 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 MLNRO43193 412 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 CLN5O75503 358 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 PTBP3O95758 552 aaKnown RBP6.54□□□□□ -1.36
USP4-207ENST00000462673 IGHV2-70P01814 119 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 IGHV2-5P01817 119 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 RAB5AP20339 215 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 CHATP28329 748 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 CD80P33681 288 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 CFHR2P36980 270 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 MDH2P40926 338 aaKnown RBP6.54□□□□□ -1.36
USP4-207ENST00000462673 HAAOP46952 286 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 RBP2P50120 134 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 TAS2R46P59540 309 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 S100A10P60903 97 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 RBM39Q14498 530 aaKnown RBP6.54□□□□□ -1.36
USP4-207ENST00000462673 MOGAT2Q3SYC2 334 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 TMEM155Q4W5P6 130 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 AKIRIN2Q53H80 203 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 DNLZQ5SXM8 178 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 CYB5R2Q6BCY4 276 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 BTNL8Q6UX41 500 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 MOGAT3Q86VF5 341 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 C1QL4Q86Z23 238 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 MKXQ8IYA7 352 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 POC1AQ8NBT0 407 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 ADAD2Q8NCV1 583 aaKnown RBP6.54□□□□□ -1.36
USP4-207ENST00000462673 LFNGQ8NES3 379 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 WFDC11Q8NEX6 87 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 OR4S1Q8NGB4 309 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 OR5H2Q8NGV7 314 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 MARCH1Q8TCQ1 289 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 PPP1R14AQ96A00 147 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 MRGPRFQ96AM1 343 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 FGGYQ96C11 551 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 RRNAD1Q96FB5 475 aaKnown RBP6.54□□□□□ -1.36
USP4-207ENST00000462673 LYZL4Q96KX0 146 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 CLCC1Q96S66 551 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 S100A13Q99584 98 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 GAL3ST1Q99999 423 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 PBDC1Q9BVG4 233 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 RPS10P5Q9NQ39 176 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 OR2S2Q9NQN1 319 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 GHRLQ9UBU3 117 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 CACFD1Q9UGQ2 172 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 STRAPQ9Y3F4 350 aaKnown RBP6.54□□□□□ -1.36
USP4-207ENST00000462673 PRR14LQ5THK1 2151 aa6.54□□□□□ -1.36
USP4-207ENST00000462673 BORCS7-ASMTA0A0B4J1R7 106 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 MSGN1A6NI15 193 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 ZNF729A6NN14 1252 aaPredicted RBP6.53□□□□□ -1.36
USP4-207ENST00000462673 RNF223E7ERA6 249 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 TMEM178BH3BS89 294 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 M0R036 132 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 RAB27BO00194 218 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 GPR37O15354 613 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 TXNL1O43396 289 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 JTBO76095 146 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 TSPAN15O95858 294 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 CHRM2P08172 466 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 OR8U8P0C7N1 319 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 FAHP16930 419 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 ACKR3P25106 362 aa6.53□□□□□ -1.36
USP4-207ENST00000462673 NPY4RP50391 375 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms