RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 CT45A3Q8NHU0 189 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 ORAI1Q96D31 301 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 RDH12Q96NR8 316 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 ZNF251Q9BRH9 671 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 SELENOIQ9C0D9 397 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 SMPD3Q9NY59 655 aaPredicted RBP12.04□□□□□ -0.48
SKA3-204ENST00000462482 DIMT1Q9UNQ2 313 aaKnown RBP12.04□□□□□ -0.48
SKA3-204ENST00000462482 VSIG4Q9Y279 399 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 ZNF256Q9Y2P7 627 aaPredicted RBP12.04□□□□□ -0.48
SKA3-204ENST00000462482 LSM4Q9Y4Z0 139 aaKnown RBP12.04□□□□□ -0.48
SKA3-204ENST00000462482 TRBV5-5A0A0J9YX44 114 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 FAM90A10PA6NDY2 464 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 FAM90A7PA6NKC0 464 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 FAM90A23PA8MXZ1 464 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 CRTAPO75718 401 aaPredicted RBP12.03□□□□□ -0.48
SKA3-204ENST00000462482 RGS11O94810 467 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 FSTP19883 344 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 FUT3P21217 361 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 PSMB8P28062 276 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 TAS2R43P59537 309 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 CFHR3Q02985 330 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 LSAMPQ13449 338 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 KIAA2026Q5HYC2 2103 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 FAM27D1Q5T7N8 215 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 FAM53AQ6NSI3 398 aaPredicted RBP12.03□□□□□ -0.48
SKA3-204ENST00000462482 ZNF554Q86TJ5 538 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 CDH26Q8IXH8 852 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 OR1N2Q8NGR9 330 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 OR13C5Q8NGS8 318 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 TMEM80Q96HE8 168 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 UBE2E2Q96LR5 201 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 TAF9BQ9HBM6 251 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 S100A14Q9HCY8 104 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 KIAA1456Q9P272 454 aa12.03□□□□□ -0.48
SKA3-204ENST00000462482 TENM3Q9P273 2699 aa12.02□□□□□ -0.49
SKA3-204ENST00000462482 WBP4O75554 376 aaKnown RBP12.02□□□□□ -0.49
SKA3-204ENST00000462482 BAG2O95816 211 aa12.02□□□□□ -0.49
SKA3-204ENST00000462482 MAS1P04201 325 aa12.02□□□□□ -0.49
SKA3-204ENST00000462482 MGMTP16455 207 aa12.02□□□□□ -0.49
SKA3-204ENST00000462482 CAPGP40121 348 aa12.02□□□□□ -0.49
SKA3-204ENST00000462482 ZNF134P52741 427 aa12.02□□□□□ -0.49
SKA3-204ENST00000462482 ZNF616Q08AN1 781 aa12.02□□□□□ -0.49
SKA3-204ENST00000462482 DMKNQ6E0U4 476 aaPredicted RBP12.02□□□□□ -0.49
SKA3-204ENST00000462482 THRSPQ92748 146 aa12.02□□□□□ -0.49
SKA3-204ENST00000462482 ABHD14AQ9BUJ0 271 aa12.02□□□□□ -0.49
SKA3-204ENST00000462482 OR51J1Q9H342 316 aa12.02□□□□□ -0.49
SKA3-204ENST00000462482 BANF2Q9H503 90 aa12.02□□□□□ -0.49
SKA3-204ENST00000462482 PARP11Q9NR21 331 aa12.02□□□□□ -0.49
SKA3-204ENST00000462482 JPT1Q9UK76 154 aa12.02□□□□□ -0.49
SKA3-204ENST00000462482 LRRC42Q9Y546 428 aa12.02□□□□□ -0.49
SKA3-204ENST00000462482 WSB1Q9Y6I7 421 aa12.02□□□□□ -0.49
SKA3-204ENST00000462482 TRAV8-7A0A075B6U6 113 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 A0A1W2PPK0 400 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 UBE2QL1A1L167 161 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 RCC1P18754 421 aaPredicted RBP12.01□□□□□ -0.49
SKA3-204ENST00000462482 ACTBP60709 375 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 FHL3Q13643 280 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 MORN2Q502X0 79 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 TTC23Q5W5X9 447 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 GAPTQ8N292 157 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 NKAIN3Q8N8D7 197 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 ZFP41Q8N8Y5 198 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 SETD9Q8NE22 299 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 OR14A2Q96R54 314 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 ASCL2Q99929 193 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 CST11Q9H112 138 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 ABRACLQ9P1F3 81 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 SCOCQ9UIL1 159 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 SMAD5-AS1Q9Y6J3 95 aa12.01□□□□□ -0.49
SKA3-204ENST00000462482 TRAV41A0A0B4J266 112 aa12□□□□□ -0.49
SKA3-204ENST00000462482 MAGEA13PA6NCF6 341 aa12□□□□□ -0.49
SKA3-204ENST00000462482 C3orf84H3BNL1 204 aa12□□□□□ -0.49
SKA3-204ENST00000462482 NBR2O15453 112 aa12□□□□□ -0.49
SKA3-204ENST00000462482 PDCD6O75340 191 aa12□□□□□ -0.49
SKA3-204ENST00000462482 SC5DO75845 299 aa12□□□□□ -0.49
SKA3-204ENST00000462482 HLA-DRB1P01911 266 aa12□□□□□ -0.49
SKA3-204ENST00000462482 MAPK3P27361 379 aaPredicted RBP12□□□□□ -0.49
SKA3-204ENST00000462482 VHLP40337 213 aa12□□□□□ -0.49
SKA3-204ENST00000462482 DOC2BQ14184 412 aa12□□□□□ -0.49
SKA3-204ENST00000462482 LIN54Q6MZP7 749 aa12□□□□□ -0.49
SKA3-204ENST00000462482 ZNF429Q86V71 674 aa12□□□□□ -0.49
SKA3-204ENST00000462482 OR2AK2Q8NG84 335 aa12□□□□□ -0.49
SKA3-204ENST00000462482 OR52L2PQ8NGH6 319 aa12□□□□□ -0.49
SKA3-204ENST00000462482 CYGBQ8WWM9 190 aa12□□□□□ -0.49
SKA3-204ENST00000462482 GALMQ96C23 342 aa12□□□□□ -0.49
SKA3-204ENST00000462482 NEDD4LQ96PU5 975 aa12□□□□□ -0.49
SKA3-204ENST00000462482 OR5B12Q96R08 314 aa12□□□□□ -0.49
SKA3-204ENST00000462482 GHRLQ9UBU3 117 aa12□□□□□ -0.49
SKA3-204ENST00000462482 CLEC2DQ9UHP7 191 aa12□□□□□ -0.49
SKA3-204ENST00000462482 TRBV5-7A0A0A0MS05 114 aa11.99□□□□□ -0.49
SKA3-204ENST00000462482 PNMA8CA0A1B0GUJ8 204 aa11.99□□□□□ -0.49
SKA3-204ENST00000462482 ATP6V0E1O15342 81 aa11.99□□□□□ -0.49
SKA3-204ENST00000462482 LALBAP00709 142 aa11.99□□□□□ -0.49
SKA3-204ENST00000462482 CHATP28329 748 aa11.99□□□□□ -0.49
SKA3-204ENST00000462482 PPP1CCP36873 323 aaKnown RBP11.99□□□□□ -0.49
SKA3-204ENST00000462482 ADARB1P78563 741 aaKnown RBP11.99□□□□□ -0.49
SKA3-204ENST00000462482 HTD2P86397 168 aa11.99□□□□□ -0.49
SKA3-204ENST00000462482 RUNX1Q01196 453 aa11.99□□□□□ -0.49
SKA3-204ENST00000462482 PLGLAQ15195 96 aa11.99□□□□□ -0.49
SKA3-204ENST00000462482 NKAPLQ5M9Q1 402 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms