RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 EIF2B1Q14232 305 aaKnown RBP5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 TAF13Q15543 124 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 AKR1C8PQ5T2L2 129 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 LINC01590Q5TEZ4 76 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 OR2G6Q5TZ20 316 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 ZNF660Q6AZW8 331 aaPredicted RBP5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 SLC18B1Q6NT16 456 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 ALKAL2Q6UX46 152 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 HIST2H3AQ71DI3 136 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 MEPCEQ7L2J0 689 aaKnown RBP5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 SSX7Q7RTT5 188 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 BCDIN3DQ7Z5W3 292 aaKnown RBP5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 ZNF573Q86YE8 665 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 TMEM185AQ8NFB2 350 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 OR56B1Q8NGI3 324 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 OR10R2Q8NGX6 335 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 OR1F12Q8NHA8 337 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 CD300LFQ8TDQ1 290 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 PCNPQ8WW12 178 aaKnown RBP5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 HIST1H2BAQ96A08 127 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 RNFT2Q96EX2 444 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 NUDT11Q96G61 164 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 SMIM8Q96KF7 97 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 ZNF75AQ96N20 296 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 CNN2Q99439 309 aaKnown RBP5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 PHB2Q99623 299 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 PRRT1Q99946 306 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 GPR173Q9NS66 373 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 MRPL22Q9NWU5 206 aaKnown RBP5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 PIPOXQ9P0Z9 390 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 PPIAL4AQ9Y536 164 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 KPTNQ9Y664 436 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 LHFPL6Q9Y693 200 aa5.04□□□□□ -1.6
SMARCC1-204ENST00000462198 EPPK1P58107 5090 aaKnown RBP5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 IGHV2OR16-5A0A0B4J2B6 119 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 LOC102723971A0A1B0GUV8 181 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 CXorf65A6NEN9 183 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 OR6C6A6NF89 314 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 RAB27BO00194 218 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 PPP1R2P9O14990 202 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 PLPP2O43688 288 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 SYNGR3O43761 229 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 IFNA21P01568 189 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 ALDOBP05062 364 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 IL5P05113 134 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 EIF4EP06730 217 aaKnown RBP5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 MRPL3P09001 348 aaKnown RBP5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 CSF1P09603 554 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 OR5AC1P0C628 307 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 SCGB1A1P11684 91 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 ZNF35P13682 527 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 CXCL2P19875 107 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 HTR1FP30939 366 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 RPS27P42677 84 aaKnown RBP5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 SELENOVP59797 346 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 OR2B8PP59922 312 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 HIST1H3AP68431 136 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 PITPNAQ00169 270 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 SRSF4Q08170 494 aaKnown RBP5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 SNTB2Q13425 540 aaKnown RBP5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 ZNF345Q14585 488 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 RBMS2Q15434 407 aaKnown RBP5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 SURF2Q15527 256 aaPredicted RBP5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 PCK2Q16822 640 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 ATP6V1FQ16864 119 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 OR8G2PQ6IF36 304 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 FAHD2BQ6P2I3 314 aaPredicted RBP5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 ARL9Q6T311 187 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 ZNF322Q6U7Q0 402 aaPredicted RBP5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 UNQ6126/PRO20091Q6UXV3 157 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 SLC16A9Q7RTY1 509 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 DPY19L4Q7Z388 723 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 ZNF584Q8IVC4 421 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 BAP18Q8IXM2 172 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 PAQR4Q8N4S7 273 aaPredicted RBP5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 Q8NFD4 153 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 OR4F15Q8NGB8 312 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 OR51G2Q8NGK0 314 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 ZNF671Q8TAW3 534 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 RNASEH2CQ8TDP1 164 aaKnown RBP5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 THEM6Q8WUY1 208 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 SPTSSAQ969W0 71 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 TMEM186Q96B77 213 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 FAHD2AQ96GK7 314 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 ZNF48Q96MX3 618 aaPredicted RBP5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 SLC6A7Q99884 636 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 SYT3Q9BQG1 590 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 C1QTNF5Q9BXJ0 243 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 ARL6Q9H0F7 186 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 ADGRL4Q9HBW9 690 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 MMP26Q9NRE1 261 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 CA10Q9NS85 328 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 CENPMQ9NSP4 180 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 HIF1ANQ9NWT6 349 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 HAO2Q9NYQ3 351 aa5.03□□□□□ -1.6
SMARCC1-204ENST00000462198 LOC100509620A0A075B734 347 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 TRAV1-2A0A0B4J238 106 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 TEX13DA0A0J9YY54 714 aaPredicted RBP5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 KANTRA0A1W2PQU2 76 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 SMCO3A2RU48 225 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms