RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 H3BMQ9 156 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 MFNGO00587 321 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 RBP4P02753 201 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 UBE2E1P51965 193 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 LRRC75BQ2VPJ9 315 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 LHFPL4Q7Z7J7 247 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 BEND2Q8NDZ0 799 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 OR1L1Q8NH94 360 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 ISOC1Q96CN7 298 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 RAB3CQ96E17 227 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 MMP28Q9H239 520 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 LINC00574Q9H8X3 128 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 ZNF286AQ9HBT8 521 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 RAB18Q9NP72 206 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 TRAPPC2LQ9UL33 140 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 HSF4Q9ULV5 492 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 SPATA2Q9UM82 520 aa11.82□□□□□ -0.52
NCK1-202ENST00000460960 IGHV2-26A0A0B4J1V2 119 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 IGHV3-43A0A0B4J1X8 118 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 ODF3BA8MYP8 253 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 IGHV3-43DP0DP04 118 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 PTHLHP12272 177 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 HIST1H1DP16402 221 aaKnown RBP11.81□□□□□ -0.52
NCK1-202ENST00000460960 NFYBP25208 207 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 TMBIM6P55061 237 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 IZUMO1Q8IYV9 350 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 DYNAPQ8N1N2 210 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 PRR18Q8N4B5 295 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 RAB2BQ8WUD1 216 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 ARL11Q969Q4 196 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 NPFFR1Q9GZQ6 430 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 TMEM133Q9H2Q1 129 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 GAL3ST2Q9H3Q3 398 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 MBNL3Q9NUK0 354 aaKnown RBP11.81□□□□□ -0.52
NCK1-202ENST00000460960 IDI2-AS1Q9NZ38 188 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 ETV7Q9Y603 341 aa11.81□□□□□ -0.52
NCK1-202ENST00000460960 A0A1W2PPE3 182 aa11.8□□□□□ -0.52
NCK1-202ENST00000460960 PEX14O75381 377 aa11.8□□□□□ -0.52
NCK1-202ENST00000460960 HBZP02008 142 aa11.8□□□□□ -0.52
NCK1-202ENST00000460960 EIF4EP06730 217 aaKnown RBP11.8□□□□□ -0.52
NCK1-202ENST00000460960 CD28P10747 220 aa11.8□□□□□ -0.52
NCK1-202ENST00000460960 GNMTQ14749 295 aa11.8□□□□□ -0.52
NCK1-202ENST00000460960 C11orf87Q6NUJ2 197 aa11.8□□□□□ -0.52
NCK1-202ENST00000460960 ZNF880Q6PDB4 577 aa11.8□□□□□ -0.52
NCK1-202ENST00000460960 SAMD12Q8N8I0 201 aa11.8□□□□□ -0.52
NCK1-202ENST00000460960 ZNF565Q8N9K5 539 aa11.8□□□□□ -0.52
NCK1-202ENST00000460960 OR4F17Q8NGA8 305 aa11.8□□□□□ -0.52
NCK1-202ENST00000460960 MAFIPQ8WZ33 124 aa11.8□□□□□ -0.52
NCK1-202ENST00000460960 OR4F4Q96R69 305 aa11.8□□□□□ -0.52
NCK1-202ENST00000460960 RANBP3Q9H6Z4 567 aaPredicted RBP11.8□□□□□ -0.52
NCK1-202ENST00000460960 HEXA-AS1Q9H8Q6 139 aa11.8□□□□□ -0.52
NCK1-202ENST00000460960 TAF9BQ9HBM6 251 aa11.8□□□□□ -0.52
NCK1-202ENST00000460960 ABRACLQ9P1F3 81 aa11.8□□□□□ -0.52
NCK1-202ENST00000460960 COMMD3Q9UBI1 195 aa11.8□□□□□ -0.52
NCK1-202ENST00000460960 KMT2CQ8NEZ4 4911 aaKnown RBP11.8□□□□□ -0.52
NCK1-202ENST00000460960 hCG_1809904A0A1W2PP81 198 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 A0A1W2PPE2 198 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 A0A1W2PR64 198 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 A0A1W2PRV1 198 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 METTL21EPA6NDL7 271 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 TMEM235A6NFC5 223 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 CA11O75493 328 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 ARG1P05089 322 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 CD33P20138 364 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 RORCP51449 518 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 SCAND1P57086 179 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 DYNC1I2Q13409 638 aaKnown RBP11.79□□□□□ -0.52
NCK1-202ENST00000460960 MADCAM1Q13477 382 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 HABP2Q14520 560 aaPredicted RBP11.79□□□□□ -0.52
NCK1-202ENST00000460960 ZNF260Q3ZCT1 412 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 CDNFQ49AH0 187 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 ARSJQ5FYB0 599 aaPredicted RBP11.79□□□□□ -0.52
NCK1-202ENST00000460960 FOXB2Q5VYV0 432 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 ZNF626Q68DY1 528 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 CROCCP3Q8IVE0 287 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 ABHD12Q8N2K0 398 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 OR11H6Q8NGC7 330 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 SETD6Q8TBK2 473 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 DYNC2LI1Q8TCX1 351 aa11.79□□□□□ -0.52
NCK1-202ENST00000460960 CMSS1Q9BQ75 279 aaKnown RBP11.79□□□□□ -0.52
NCK1-202ENST00000460960 CHMP1AQ9HD42 196 aaPredicted RBP11.79□□□□□ -0.52
NCK1-202ENST00000460960 ZNF230Q9UIE0 474 aaPredicted RBP11.79□□□□□ -0.52
NCK1-202ENST00000460960 IGKV1D-8A0A087WSZ0 117 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 F2RL2O00254 374 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 SLC31A2O15432 143 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 ORC5O43913 435 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 CHST1O43916 411 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 SSX5O60225 188 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 HPGDSO60760 199 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 GZMHP20718 246 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 CD34P28906 385 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 RANBP1P43487 201 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 GNG10P50151 68 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 HMGN3Q15651 99 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 PLA1AQ53H76 456 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 DEFB121Q5J5C9 76 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 OR52L2PQ8NGH6 319 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 OR10V1Q8NGI7 309 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 OR4P4Q8NGL7 312 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 OR13D1Q8NGV5 346 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms