RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 PLGRKTQ9HBL7 147 aa12.84□□□□□ -0.35
COL7A1-203ENST00000459756 TAF9BQ9HBM6 251 aa12.84□□□□□ -0.35
COL7A1-203ENST00000459756 IGHV1-3A0A0C4DH29 117 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 TMEM14DPA8MWL7 114 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 SLC17A2O00624 439 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 WIPF1O43516 503 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 OPN1MWP04001 364 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 OPN1MW2P0DN77 364 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 OPN1MW3P0DN78 364 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 RANBP1P43487 201 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 FABP5Q01469 135 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 DEFA6Q01524 100 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 SLC25A48Q6ZT89 311 aaKnown RBP12.83□□□□□ -0.36
COL7A1-203ENST00000459756 OR2W3Q7Z3T1 314 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 CENPVQ7Z7K6 275 aaPredicted RBP12.83□□□□□ -0.36
COL7A1-203ENST00000459756 MOB3BQ86TA1 216 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 ZNF439Q8NDP4 499 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 OR5AU1Q8NGC0 362 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 ST6GALNAC6Q969X2 333 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 SULT4A1Q9BR01 284 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 OR2S2Q9NQN1 319 aa12.83□□□□□ -0.36
COL7A1-203ENST00000459756 A0A087WXM4 84 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 FGF16O43320 207 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 TXNL1O43396 289 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 IGKV1D-33P01593 117 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 IGKV1-33P01594 117 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 ARSBP15848 533 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 CALRP27797 417 aaKnown RBP12.82□□□□□ -0.36
COL7A1-203ENST00000459756 REG1BP48304 166 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 PSMD7P51665 324 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 ZNF137PP52743 207 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 EBI3Q14213 229 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 HNF4GQ14541 408 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 P2RY14Q15391 338 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 RAB11BQ15907 218 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 NSUN5P1Q3KNT7 163 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 C9orf152Q5JTZ5 239 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 FAM53AQ6NSI3 398 aaPredicted RBP12.82□□□□□ -0.36
COL7A1-203ENST00000459756 C6orf201Q7Z4U5 140 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 IZUMO1Q8IYV9 350 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 LYG1Q8N1E2 194 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 OR10V1Q8NGI7 309 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 RTN4IP1Q8WWV3 396 aaPredicted RBP12.82□□□□□ -0.36
COL7A1-203ENST00000459756 GFI1Q99684 422 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 URM1Q9BTM9 101 aaKnown RBP12.82□□□□□ -0.36
COL7A1-203ENST00000459756 FAAP24Q9BTP7 215 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 KCNK15Q9H427 330 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 VCX3AQ9NNX9 186 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 NDUFB11Q9NX14 153 aa12.82□□□□□ -0.36
COL7A1-203ENST00000459756 AK6Q9Y3D8 172 aaKnown RBP12.82□□□□□ -0.36
COL7A1-203ENST00000459756 SH2D7A6NKC9 451 aaPredicted RBP12.81□□□□□ -0.36
COL7A1-203ENST00000459756 SLC31A2O15432 143 aa12.81□□□□□ -0.36
COL7A1-203ENST00000459756 KCNAB3O43448 404 aa12.81□□□□□ -0.36
COL7A1-203ENST00000459756 BLVRBP30043 206 aaPredicted RBP12.81□□□□□ -0.36
COL7A1-203ENST00000459756 ZNF134P52741 427 aa12.81□□□□□ -0.36
COL7A1-203ENST00000459756 HTD2P86397 168 aa12.81□□□□□ -0.36
COL7A1-203ENST00000459756 CT45A1Q5HYN5 189 aa12.81□□□□□ -0.36
COL7A1-203ENST00000459756 C5orf56Q8N8D9 126 aa12.81□□□□□ -0.36
COL7A1-203ENST00000459756 OR4F17Q8NGA8 305 aa12.81□□□□□ -0.36
COL7A1-203ENST00000459756 CT45A3Q8NHU0 189 aa12.81□□□□□ -0.36
COL7A1-203ENST00000459756 CYYR1Q96J86 154 aa12.81□□□□□ -0.36
COL7A1-203ENST00000459756 OR4F4Q96R69 305 aa12.81□□□□□ -0.36
COL7A1-203ENST00000459756 NICN1Q9BSH3 213 aa12.81□□□□□ -0.36
COL7A1-203ENST00000459756 PLEKHJ1Q9NW61 149 aa12.81□□□□□ -0.36
COL7A1-203ENST00000459756 JPT1Q9UK76 154 aa12.81□□□□□ -0.36
COL7A1-203ENST00000459756 ADARB2-AS1A8MUL3 147 aa12.8□□□□□ -0.36
COL7A1-203ENST00000459756 CD1BP29016 333 aa12.8□□□□□ -0.36
COL7A1-203ENST00000459756 CD83Q01151 205 aa12.8□□□□□ -0.36
COL7A1-203ENST00000459756 MORN2Q502X0 79 aa12.8□□□□□ -0.36
COL7A1-203ENST00000459756 LY6G6FQ5SQ64 297 aa12.8□□□□□ -0.36
COL7A1-203ENST00000459756 TGIF2LXQ8IUE1 241 aa12.8□□□□□ -0.36
COL7A1-203ENST00000459756 FAM89BQ8N5H3 189 aa12.8□□□□□ -0.36
COL7A1-203ENST00000459756 OR4X2Q8NGF9 303 aa12.8□□□□□ -0.36
COL7A1-203ENST00000459756 OR2T10Q8NGZ9 312 aa12.8□□□□□ -0.36
COL7A1-203ENST00000459756 GALMQ96C23 342 aa12.8□□□□□ -0.36
COL7A1-203ENST00000459756 EAF1Q96JC9 268 aaPredicted RBP12.8□□□□□ -0.36
COL7A1-203ENST00000459756 LPAR5Q9H1C0 372 aa12.8□□□□□ -0.36
COL7A1-203ENST00000459756 RIMS4Q9H426 269 aaPredicted RBP12.8□□□□□ -0.36
COL7A1-203ENST00000459756 ABRACLQ9P1F3 81 aa12.8□□□□□ -0.36
COL7A1-203ENST00000459756 V9GY05 133 aa12.8□□□□□ -0.36
COL7A1-203ENST00000459756 A0A0A6YYD4 124 aa12.79□□□□□ -0.36
COL7A1-203ENST00000459756 IGHV3-72A0A0B4J1Y9 119 aa12.79□□□□□ -0.36
COL7A1-203ENST00000459756 RGS11O94810 467 aa12.79□□□□□ -0.36
COL7A1-203ENST00000459756 NAPSAO96009 420 aa12.79□□□□□ -0.36
COL7A1-203ENST00000459756 HMGN3Q15651 99 aa12.79□□□□□ -0.36
COL7A1-203ENST00000459756 C22orf42Q6IC83 251 aa12.79□□□□□ -0.36
COL7A1-203ENST00000459756 Q8N6K4 173 aa12.79□□□□□ -0.36
COL7A1-203ENST00000459756 OR52L2PQ8NGH6 319 aa12.79□□□□□ -0.36
COL7A1-203ENST00000459756 FAM3DQ96BQ1 224 aa12.79□□□□□ -0.36
COL7A1-203ENST00000459756 R3HDM4Q96D70 268 aa12.79□□□□□ -0.36
COL7A1-203ENST00000459756 ABHD14AQ9BUJ0 271 aa12.79□□□□□ -0.36
COL7A1-203ENST00000459756 CHMP1AQ9HD42 196 aaPredicted RBP12.79□□□□□ -0.36
COL7A1-203ENST00000459756 HSF4Q9ULV5 492 aa12.79□□□□□ -0.36
COL7A1-203ENST00000459756 TRAV1-2A0A0B4J238 106 aa12.78□□□□□ -0.36
COL7A1-203ENST00000459756 TCRBV4S1A1TA0A5B7 111 aa12.78□□□□□ -0.36
COL7A1-203ENST00000459756 PDCD5O14737 125 aa12.78□□□□□ -0.36
COL7A1-203ENST00000459756 SOCS1O15524 211 aa12.78□□□□□ -0.36
COL7A1-203ENST00000459756 LANCL1O43813 399 aa12.78□□□□□ -0.36
COL7A1-203ENST00000459756 YPEL1O60688 119 aa12.78□□□□□ -0.36
COL7A1-203ENST00000459756 MOSP00540 346 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms