RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 OOSP1A8MZH6 123 aa14.96□□□□□ -0.01
USP39-209ENST00000458268 M0QZ24 198 aa14.96□□□□□ -0.01
USP39-209ENST00000458268 TMEM11P17152 192 aa14.96□□□□□ -0.01
USP39-209ENST00000458268 PPP1CCP36873 323 aaKnown RBP14.96□□□□□ -0.01
USP39-209ENST00000458268 VDAC2P45880 294 aaPredicted RBP14.96□□□□□ -0.01
USP39-209ENST00000458268 RAB7AP51149 207 aa14.96□□□□□ -0.01
USP39-209ENST00000458268 ABCA11PQ4W5N1 156 aa14.96□□□□□ -0.01
USP39-209ENST00000458268 SLC16A12Q6ZSM3 486 aa14.96□□□□□ -0.01
USP39-209ENST00000458268 LYG1Q8N1E2 194 aa14.96□□□□□ -0.01
USP39-209ENST00000458268 CHCHD6Q9BRQ6 235 aa14.96□□□□□ -0.01
USP39-209ENST00000458268 TXNL4BQ9NX01 149 aaKnown RBP14.96□□□□□ -0.01
USP39-209ENST00000458268 ABRACLQ9P1F3 81 aa14.96□□□□□ -0.01
USP39-209ENST00000458268 STUB1Q9UNE7 303 aa14.96□□□□□ -0.01
USP39-209ENST00000458268 SSR3Q9UNL2 185 aa14.96□□□□□ -0.01
USP39-209ENST00000458268 TRAV1-2A0A0B4J238 106 aa14.95□□□□□ -0.02
USP39-209ENST00000458268 IGKV1D-33P01593 117 aa14.95□□□□□ -0.02
USP39-209ENST00000458268 IGKV1-33P01594 117 aa14.95□□□□□ -0.02
USP39-209ENST00000458268 GAPDHP04406 335 aaKnown RBP14.95□□□□□ -0.02
USP39-209ENST00000458268 FAM106CPP0CH98 169 aa14.95□□□□□ -0.02
USP39-209ENST00000458268 SLC2A2P11168 524 aaPredicted RBP14.95□□□□□ -0.02
USP39-209ENST00000458268 CD200R1LQ6Q8B3 271 aa14.95□□□□□ -0.02
USP39-209ENST00000458268 GAPTQ8N292 157 aa14.95□□□□□ -0.02
USP39-209ENST00000458268 ARHGAP5-AS1Q96IT6 56 aa14.95□□□□□ -0.02
USP39-209ENST00000458268 OR51E2Q9H255 320 aa14.95□□□□□ -0.02
USP39-209ENST00000458268 ZNF696Q9H7X3 374 aa14.95□□□□□ -0.02
USP39-209ENST00000458268 LIN7BQ9HAP6 207 aa14.95□□□□□ -0.02
USP39-209ENST00000458268 IFITM5A6NNB3 132 aa14.94□□□□□ -0.02
USP39-209ENST00000458268 OR2F2O95006 317 aa14.94□□□□□ -0.02
USP39-209ENST00000458268 LPLP06858 475 aa14.94□□□□□ -0.02
USP39-209ENST00000458268 CD37P11049 281 aa14.94□□□□□ -0.02
USP39-209ENST00000458268 MRPS15P82914 257 aaKnown RBP14.94□□□□□ -0.02
USP39-209ENST00000458268 HERPUD1Q15011 391 aa14.94□□□□□ -0.02
USP39-209ENST00000458268 KCTD21Q4G0X4 260 aa14.94□□□□□ -0.02
USP39-209ENST00000458268 TREML4Q6UXN2 200 aa14.94□□□□□ -0.02
USP39-209ENST00000458268 DTX3Q8N9I9 347 aa14.94□□□□□ -0.02
USP39-209ENST00000458268 OR56B1Q8NGI3 324 aa14.94□□□□□ -0.02
USP39-209ENST00000458268 GALMQ96C23 342 aa14.94□□□□□ -0.02
USP39-209ENST00000458268 RBMXL1Q96E39 390 aaKnown RBP14.94□□□□□ -0.02
USP39-209ENST00000458268 RBM14Q96PK6 669 aaKnown RBP14.94□□□□□ -0.02
USP39-209ENST00000458268 OCSTAMPQ9BR26 566 aa14.94□□□□□ -0.02
USP39-209ENST00000458268 PECRQ9BY49 303 aa14.94□□□□□ -0.02
USP39-209ENST00000458268 MBNL3Q9NUK0 354 aaKnown RBP14.94□□□□□ -0.02
USP39-209ENST00000458268 IGHV1-3A0A0C4DH29 117 aa14.93□□□□□ -0.02
USP39-209ENST00000458268 RANBP1P43487 201 aa14.93□□□□□ -0.02
USP39-209ENST00000458268 MXD1Q05195 221 aa14.93□□□□□ -0.02
USP39-209ENST00000458268 CT45A1Q5HYN5 189 aa14.93□□□□□ -0.02
USP39-209ENST00000458268 PRR31Q5SQ13 230 aa14.93□□□□□ -0.02
USP39-209ENST00000458268 C16orf82Q7Z2V1 217 aa14.93□□□□□ -0.02
USP39-209ENST00000458268 TGIF2LXQ8IUE1 241 aa14.93□□□□□ -0.02
USP39-209ENST00000458268 OR8H3Q8N146 312 aa14.93□□□□□ -0.02
USP39-209ENST00000458268 CT45A3Q8NHU0 189 aa14.93□□□□□ -0.02
USP39-209ENST00000458268 FAM110DQ8TAY7 271 aaPredicted RBP14.93□□□□□ -0.02
USP39-209ENST00000458268 CMSS1Q9BQ75 279 aaKnown RBP14.93□□□□□ -0.02
USP39-209ENST00000458268 SERTAD4Q9NUC0 356 aa14.93□□□□□ -0.02
USP39-209ENST00000458268 RAB22AQ9UL26 194 aa14.93□□□□□ -0.02
USP39-209ENST00000458268 MOB4Q9Y3A3 225 aa14.93□□□□□ -0.02
USP39-209ENST00000458268 NBEAL1Q6ZS30 2694 aa14.92□□□□□ -0.02
USP39-209ENST00000458268 TSPAN15O95858 294 aa14.92□□□□□ -0.02
USP39-209ENST00000458268 GADD45AP24522 165 aa14.92□□□□□ -0.02
USP39-209ENST00000458268 ZNF134P52741 427 aa14.92□□□□□ -0.02
USP39-209ENST00000458268 ZNF816Q0VGE8 651 aaPredicted RBP14.92□□□□□ -0.02
USP39-209ENST00000458268 NSUN5P1Q3KNT7 163 aa14.92□□□□□ -0.02
USP39-209ENST00000458268 TMEM30BQ3MIR4 351 aa14.92□□□□□ -0.02
USP39-209ENST00000458268 MORN2Q502X0 79 aa14.92□□□□□ -0.02
USP39-209ENST00000458268 C11orf88Q6PI97 169 aa14.92□□□□□ -0.02
USP39-209ENST00000458268 SLC25A48Q6ZT89 311 aaKnown RBP14.92□□□□□ -0.02
USP39-209ENST00000458268 LINC00311Q8N616 119 aa14.92□□□□□ -0.02
USP39-209ENST00000458268 ZNF439Q8NDP4 499 aa14.92□□□□□ -0.02
USP39-209ENST00000458268 CFHR4Q92496 578 aa14.92□□□□□ -0.02
USP39-209ENST00000458268 ABHD14AQ9BUJ0 271 aa14.92□□□□□ -0.02
USP39-209ENST00000458268 RNF167Q9H6Y7 350 aa14.92□□□□□ -0.02
USP39-209ENST00000458268 JPT1Q9UK76 154 aa14.92□□□□□ -0.02
USP39-209ENST00000458268 NCBP2LA6PVI3 153 aaKnown RBP14.91□□□□□ -0.02
USP39-209ENST00000458268 HSPA12AO43301 675 aa14.91□□□□□ -0.02
USP39-209ENST00000458268 FBXO24O75426 580 aa14.91□□□□□ -0.02
USP39-209ENST00000458268 RGS11O94810 467 aa14.91□□□□□ -0.02
USP39-209ENST00000458268 CD3GP09693 182 aa14.91□□□□□ -0.02
USP39-209ENST00000458268 CD28P10747 220 aa14.91□□□□□ -0.02
USP39-209ENST00000458268 CD36P16671 472 aa14.91□□□□□ -0.02
USP39-209ENST00000458268 TMEM50BP56557 158 aa14.91□□□□□ -0.02
USP39-209ENST00000458268 HMGN3Q15651 99 aa14.91□□□□□ -0.02
USP39-209ENST00000458268 MOGAT2Q3SYC2 334 aa14.91□□□□□ -0.02
USP39-209ENST00000458268 MOB1BQ7L9L4 216 aa14.91□□□□□ -0.02
USP39-209ENST00000458268 NR2C2APQ86WQ0 139 aa14.91□□□□□ -0.02
USP39-209ENST00000458268 FAM89BQ8N5H3 189 aa14.91□□□□□ -0.02
USP39-209ENST00000458268 RTN4IP1Q8WWV3 396 aaPredicted RBP14.91□□□□□ -0.02
USP39-209ENST00000458268 RAB3CQ96E17 227 aa14.91□□□□□ -0.02
USP39-209ENST00000458268 ATG5Q9H1Y0 275 aa14.91□□□□□ -0.02
USP39-209ENST00000458268 C12orf4Q9NQ89 552 aa14.91□□□□□ -0.02
USP39-209ENST00000458268 DAPK2Q9UIK4 370 aa14.91□□□□□ -0.02
USP39-209ENST00000458268 LDLRAD4O15165 306 aa14.9□□□□□ -0.02
USP39-209ENST00000458268 ST8SIA5O15466 376 aa14.9□□□□□ -0.02
USP39-209ENST00000458268 NAPSAO96009 420 aa14.9□□□□□ -0.02
USP39-209ENST00000458268 CSF1P09603 554 aa14.9□□□□□ -0.02
USP39-209ENST00000458268 CLEC2LP0C7M8 214 aa14.9□□□□□ -0.02
USP39-209ENST00000458268 GALP22466 123 aa14.9□□□□□ -0.02
USP39-209ENST00000458268 HLA-DRB3P79483 266 aa14.9□□□□□ -0.02
USP39-209ENST00000458268 C2orf68Q2NKX9 166 aa14.9□□□□□ -0.02
USP39-209ENST00000458268 PLAC9Q5JTB6 97 aa14.9□□□□□ -0.02
USP39-209ENST00000458268 Q6ZPA2 131 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms