RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 ULBP3Q9BZM4 244 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 C3orf14Q9HBI5 128 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 ACER3Q9NUN7 267 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 CISD1Q9NZ45 108 aaKnown RBP4.51□□□□□ -1.69
VPS41-209ENST00000457055 NTNG1Q9Y2I2 539 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 POLR1DQ9Y2S0 133 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 WIPI2Q9Y4P8 454 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 DMXL1Q9Y485 3027 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 ACACBO00763 2458 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 MYO15AQ9UKN7 3530 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 NCOR2Q9Y618 2525 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 MYO7AQ13402 2215 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 NFASCO94856 1347 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 CDK5RAP2Q96SN8 1893 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 A0A096LPK6 155 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 IGHV2OR16-5A0A0B4J2B6 119 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 A0A1B0GTH9 108 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 A0A1B0GV50 99 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 TMEM269A0A1B0GVZ9 245 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 DDTLA6NHG4 134 aaPredicted RBP4.5□□□□□ -1.69
VPS41-209ENST00000457055 EPOPA6NHQ4 379 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 C15orf61A6NNL5 157 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 CYSRT1A8MQ03 144 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 RPL36A-HNRNPH2H7BZ11 118 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 SAP18O00422 153 aaKnown RBP4.5□□□□□ -1.69
VPS41-209ENST00000457055 GAPDHSO14556 408 aaPredicted RBP4.5□□□□□ -1.69
VPS41-209ENST00000457055 MRPS14O60783 128 aaKnown RBP4.5□□□□□ -1.69
VPS41-209ENST00000457055 NXPH3O95157 252 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 OR5AC1P0C628 307 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 ACP2P11117 423 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 IL9P15248 144 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 GGT1P19440 569 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 ATP6V0CP27449 155 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 IMPA1P29218 277 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 MPGP29372 298 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 SRIP30626 198 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 G6PCP35575 357 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 OPRL1P41146 370 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 GPR6P46095 362 aaPredicted RBP4.5□□□□□ -1.69
VPS41-209ENST00000457055 CLDN17P56750 224 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 RAB38P57729 211 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 SLC35A2P78381 396 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 TNFAIP6P98066 277 aaPredicted RBP4.5□□□□□ -1.69
VPS41-209ENST00000457055 PNRC1Q12796 327 aaPredicted RBP4.5□□□□□ -1.69
VPS41-209ENST00000457055 CLINT1Q14677 625 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 RAB35Q15286 201 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 SIX1Q15475 284 aaPredicted RBP4.5□□□□□ -1.69
VPS41-209ENST00000457055 ENTPD8Q5MY95 495 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 LCN10Q6JVE6 187 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 GOLT1AQ6ZVE7 132 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 TMUB2Q71RG4 321 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 ZNF664Q8N3J9 261 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 KRTCAP2Q8N6L1 136 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 RELL2Q8NC24 303 aaPredicted RBP4.5□□□□□ -1.69
VPS41-209ENST00000457055 OR4K5Q8NGD3 323 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 OR10D4PQ8NGN7 298 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 OR2T4Q8NH00 348 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 THAP6Q8TBB0 222 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 RNF128Q8TEB7 428 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 PCED1BQ96HM7 432 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 KCTD14Q9BQ13 255 aaPredicted RBP4.5□□□□□ -1.69
VPS41-209ENST00000457055 TMEM70Q9BUB7 260 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 APOOQ9BUR5 198 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 TMEM59Q9BXS4 323 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 KRTAP1-5Q9BYS1 174 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 COA1Q9GZY4 146 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 GTSF1LQ9H1H1 148 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 IFI27L2Q9H2X8 130 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 OR51I2Q9H344 312 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 VSIRQ9H7M9 311 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 PELI2Q9HAT8 420 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 SMCO4Q9NRQ5 59 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 SERTAD4Q9NUC0 356 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 MRPL27Q9P0M9 148 aaKnown RBP4.5□□□□□ -1.69
VPS41-209ENST00000457055 Q9UF83 564 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 BOKQ9UMX3 212 aaPredicted RBP4.5□□□□□ -1.69
VPS41-209ENST00000457055 SCML2Q9UQR0 700 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 RAI2Q9Y5P3 530 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 SPIN1Q9Y657 262 aaPredicted RBP4.5□□□□□ -1.69
VPS41-209ENST00000457055 SIRT4Q9Y6E7 314 aaPredicted RBP4.5□□□□□ -1.69
VPS41-209ENST00000457055 CACNA1FO60840 1977 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 CACNA1HO95180 2353 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 VPS13AQ96RL7 3174 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 SCN5AQ14524 2016 aa4.5□□□□□ -1.69
VPS41-209ENST00000457055 GPR179Q6PRD1 2367 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 MTCL1Q9Y4B5 1905 aaKnown RBP4.49□□□□□ -1.69
VPS41-209ENST00000457055 LOC102724200A0A096LPH7 203 aaPredicted RBP4.49□□□□□ -1.69
VPS41-209ENST00000457055 D6RAR5 112 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 H7C1C5 153 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 GABRPO00591 440 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 HSD17B6O14756 317 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 ZNF207O43670 478 aaKnown RBP4.49□□□□□ -1.69
VPS41-209ENST00000457055 TRAF3IP2O43734 574 aaPredicted RBP4.49□□□□□ -1.69
VPS41-209ENST00000457055 TMPRSS11DO60235 418 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 EEDO75530 441 aaKnown RBP4.49□□□□□ -1.69
VPS41-209ENST00000457055 KBTBD11O94819 623 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 MPC2O95563 127 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 CLDN1O95832 211 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 PMP2P02689 132 aa4.49□□□□□ -1.69
VPS41-209ENST00000457055 IL3P08700 152 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms