RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 LINC00311Q8N616 119 aa14.49□□□□□ -0.09
PDLIM2-215ENST00000456545 KLHDC1Q8N7A1 406 aa14.49□□□□□ -0.09
PDLIM2-215ENST00000456545 C8orf31Q8N9H6 132 aa14.49□□□□□ -0.09
PDLIM2-215ENST00000456545 OR56B4Q8NH76 319 aa14.49□□□□□ -0.09
PDLIM2-215ENST00000456545 RBM14Q96PK6 669 aaKnown RBP14.49□□□□□ -0.09
PDLIM2-215ENST00000456545 ZNF702PQ9H963 129 aa14.49□□□□□ -0.09
PDLIM2-215ENST00000456545 VCX3AQ9NNX9 186 aa14.49□□□□□ -0.09
PDLIM2-215ENST00000456545 TXNL4BQ9NX01 149 aaKnown RBP14.49□□□□□ -0.09
PDLIM2-215ENST00000456545 A0A0A6YYD4 124 aa14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 TMEM272A0A1B0GTI8 110 aa14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 OR2F2O95006 317 aa14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 SNRNP70P08621 437 aaKnown RBP14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 FGF9P31371 208 aaPredicted RBP14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 VDAC2P45880 294 aaPredicted RBP14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 REG1BP48304 166 aa14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 DIAPH2-AS1Q14236 149 aa14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 HABP2Q14520 560 aaPredicted RBP14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 HNF4GQ14541 408 aa14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 C9orf152Q5JTZ5 239 aa14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 FAM53AQ6NSI3 398 aaPredicted RBP14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 OR52L2PQ8NGH6 319 aa14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 IL1F10Q8WWZ1 152 aa14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 CYYR1Q96J86 154 aa14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 AK3Q9UIJ7 227 aa14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 HSF4Q9ULV5 492 aa14.48□□□□□ -0.09
PDLIM2-215ENST00000456545 SHISA3A0PJX4 238 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 SMIM30A4D0T7 59 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 METTL21EPA6NDL7 271 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 M0QZK8 103 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 TMEM11P17152 192 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 GADD45AP24522 165 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 HTD2P86397 168 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 ZNF816Q0VGE8 651 aaPredicted RBP14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 HERPUD1Q15011 391 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 ABCA11PQ4W5N1 156 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 MORN2Q502X0 79 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 PRR31Q5SQ13 230 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 MOB1BQ7L9L4 216 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 TPRA1Q86W33 373 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 ARHGAP5-AS1Q96IT6 56 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 CMSS1Q9BQ75 279 aaKnown RBP14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 CHCHD6Q9BRQ6 235 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 PECRQ9BY49 303 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 OR51E2Q9H255 320 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 JPT1Q9UK76 154 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 MGAT4AQ9UM21 535 aa14.47□□□□□ -0.09
PDLIM2-215ENST00000456545 IGHV1-3A0A0C4DH29 117 aa14.46□□□□□ -0.09
PDLIM2-215ENST00000456545 LOC100506127A0A0U1RQW1 187 aa14.46□□□□□ -0.09
PDLIM2-215ENST00000456545 A0A1W2PPI3 338 aa14.46□□□□□ -0.09
PDLIM2-215ENST00000456545 TNFAIP8O95379 198 aa14.46□□□□□ -0.09
PDLIM2-215ENST00000456545 CD36P16671 472 aa14.46□□□□□ -0.09
PDLIM2-215ENST00000456545 TMEM50BP56557 158 aa14.46□□□□□ -0.09
PDLIM2-215ENST00000456545 CT45A1Q5HYN5 189 aa14.46□□□□□ -0.09
PDLIM2-215ENST00000456545 STEAP3Q658P3 488 aa14.46□□□□□ -0.09
PDLIM2-215ENST00000456545 SLC25A48Q6ZT89 311 aaKnown RBP14.46□□□□□ -0.09
PDLIM2-215ENST00000456545 C5orf24Q7Z6I8 188 aa14.46□□□□□ -0.09
PDLIM2-215ENST00000456545 TGIF2LXQ8IUE1 241 aa14.46□□□□□ -0.09
PDLIM2-215ENST00000456545 LYG1Q8N1E2 194 aa14.46□□□□□ -0.09
PDLIM2-215ENST00000456545 C11orf44Q8N8P7 122 aa14.46□□□□□ -0.09
PDLIM2-215ENST00000456545 CT45A3Q8NHU0 189 aa14.46□□□□□ -0.09
PDLIM2-215ENST00000456545 RAB3CQ96E17 227 aa14.46□□□□□ -0.09
PDLIM2-215ENST00000456545 KCTD7Q96MP8 289 aa14.46□□□□□ -0.09
PDLIM2-215ENST00000456545 ANK2Q01484 3957 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 A0A087WXM4 84 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 IGHV3-72A0A0B4J1Y9 119 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 FAM90A9PA6NNJ1 464 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 NOTOA8MTQ0 251 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 SLC31A2O15432 143 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 YPEL1O60688 119 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 NAPSAO96009 420 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 IGKV1D-33P01593 117 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 IGKV1-33P01594 117 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 CD3GP09693 182 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 PPP1CCP36873 323 aaKnown RBP14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 ZNF134P52741 427 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 HMGN3Q15651 99 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 TREML4Q6UXN2 200 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 Q8N2B8 174 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 TSPAN14Q8NG11 270 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 RTN4IP1Q8WWV3 396 aaPredicted RBP14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 YPEL2Q96QA6 119 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 ATG5Q9H1Y0 275 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 SERTAD4Q9NUC0 356 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 MOB4Q9Y3A3 225 aa14.45□□□□□ -0.1
PDLIM2-215ENST00000456545 A0A075B6Q4 140 aa14.44□□□□□ -0.1
PDLIM2-215ENST00000456545 LDLRAD4O15165 306 aa14.44□□□□□ -0.1
PDLIM2-215ENST00000456545 HSPA12AO43301 675 aa14.44□□□□□ -0.1
PDLIM2-215ENST00000456545 TXNL1O43396 289 aa14.44□□□□□ -0.1
PDLIM2-215ENST00000456545 SLC2A2P11168 524 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-215ENST00000456545 RAB6AP20340 208 aa14.44□□□□□ -0.1
PDLIM2-215ENST00000456545 MXD1Q05195 221 aa14.44□□□□□ -0.1
PDLIM2-215ENST00000456545 GNMTQ14749 295 aa14.44□□□□□ -0.1
PDLIM2-215ENST00000456545 Q6ZS46 218 aa14.44□□□□□ -0.1
PDLIM2-215ENST00000456545 CENPVQ7Z7K6 275 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-215ENST00000456545 ZNF439Q8NDP4 499 aa14.44□□□□□ -0.1
PDLIM2-215ENST00000456545 OR2AK2Q8NG84 335 aa14.44□□□□□ -0.1
PDLIM2-215ENST00000456545 OR10R2Q8NGX6 335 aa14.44□□□□□ -0.1
PDLIM2-215ENST00000456545 OR2T10Q8NGZ9 312 aa14.44□□□□□ -0.1
PDLIM2-215ENST00000456545 CFHR4Q92496 578 aa14.44□□□□□ -0.1
PDLIM2-215ENST00000456545 HDHD3Q9BSH5 251 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms