RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 LSAMPQ13449 338 aa8.49□□□□□ -1.05
USP1-204ENST00000452143 MMDQ15546 238 aa8.49□□□□□ -1.05
USP1-204ENST00000452143 SLC22A6Q4U2R8 563 aa8.49□□□□□ -1.05
USP1-204ENST00000452143 SYT6Q5T7P8 510 aaPredicted RBP8.49□□□□□ -1.05
USP1-204ENST00000452143 XAF1Q6GPH4 301 aa8.49□□□□□ -1.05
USP1-204ENST00000452143 ZNF554Q86TJ5 538 aa8.49□□□□□ -1.05
USP1-204ENST00000452143 APH1BQ8WW43 257 aa8.49□□□□□ -1.05
USP1-204ENST00000452143 ETAA1Q9NY74 926 aa8.49□□□□□ -1.05
USP1-204ENST00000452143 FAM53CQ9NYF3 392 aa8.49□□□□□ -1.05
USP1-204ENST00000452143 SMAD5-AS1Q9Y6J3 95 aa8.49□□□□□ -1.05
USP1-204ENST00000452143 RYR2Q92736 4967 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 LOC100130705A0A1B0GUX0 176 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 A0A1W2PP11 408 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 IRGMA1A4Y4 181 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 FAM90A10PA6NDY2 464 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 FAM90A7PA6NKC0 464 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 FAM90A23PA8MXZ1 464 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 GPX5O75715 221 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 SC5DO75845 299 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 HLA-DRB1P01911 266 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 HBZP02008 142 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 SLC2A2P11168 524 aaPredicted RBP8.48□□□□□ -1.05
USP1-204ENST00000452143 PPIFP30405 207 aaKnown RBP8.48□□□□□ -1.05
USP1-204ENST00000452143 ZNF134P52741 427 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 F2RL1P55085 397 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 ZNF616Q08AN1 781 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 CT45A1Q5HYN5 189 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 FAM27D1Q5T7N8 215 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 RAB12Q6IQ22 244 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 FAM53AQ6NSI3 398 aaPredicted RBP8.48□□□□□ -1.05
USP1-204ENST00000452143 TMEM65Q6PI78 240 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 C10orf67Q8IYJ2 551 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 PRR18Q8N4B5 295 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 CT45A3Q8NHU0 189 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 JPT1Q9UK76 154 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 VSIG4Q9Y279 399 aa8.48□□□□□ -1.05
USP1-204ENST00000452143 TRBV5-5A0A0J9YX44 114 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 I3L521 148 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 ATP6V0E1O15342 81 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 OGG1O15527 345 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 IGLV1-40P01703 118 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 GLAP06280 429 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 MYL12AP19105 171 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 MYF6P23409 242 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 ETV1P50549 477 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 ACTBP60709 375 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 Q499Y3 187 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 YIF1BQ5BJH7 314 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 XP32Q5T750 250 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 OR2G6Q5TZ20 316 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 ZNF429Q86V71 674 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 CDH26Q8IXH8 852 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 ZNF491Q8N8L2 437 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 OR10V1Q8NGI7 309 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 OR1N2Q8NGR9 330 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 OR4K15Q8NH41 348 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 RDH12Q96NR8 316 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 ABHD14AQ9BUJ0 271 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 OR51J1Q9H342 316 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 ISYNA1Q9NPH2 558 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 MBNL3Q9NUK0 354 aaKnown RBP8.47□□□□□ -1.05
USP1-204ENST00000452143 BABAM2Q9NXR7 383 aa8.47□□□□□ -1.05
USP1-204ENST00000452143 MRPS28Q9Y2Q9 187 aaKnown RBP8.47□□□□□ -1.05
USP1-204ENST00000452143 CSMD3Q7Z407 3707 aa8.46□□□□□ -1.05
USP1-204ENST00000452143 LYSTQ99698 3801 aa8.46□□□□□ -1.05
USP1-204ENST00000452143 TRAV41A0A0B4J266 112 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 MAGEA13PA6NCF6 341 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 NBR2O15453 112 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 WBP4O75554 376 aaKnown RBP8.46□□□□□ -1.06
USP1-204ENST00000452143 LY86O95711 162 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 RCC1P18754 421 aaPredicted RBP8.46□□□□□ -1.06
USP1-204ENST00000452143 HTD2P86397 168 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 MED21Q13503 144 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 KIAA0141Q14154 515 aaPredicted RBP8.46□□□□□ -1.06
USP1-204ENST00000452143 SMN1Q16637 294 aaKnown RBP8.46□□□□□ -1.06
USP1-204ENST00000452143 MORN2Q502X0 79 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 LY6G6FQ5SQ64 297 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 ASPHD1Q5U4P2 390 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 DMKNQ6E0U4 476 aaPredicted RBP8.46□□□□□ -1.06
USP1-204ENST00000452143 AWAT2Q6E213 333 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 FAM71F2Q6NXP2 309 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 GLIPR1L1Q6UWM5 242 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 JAGN1Q8N5M9 183 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 TCTEX1D1Q8N7M0 179 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 NKAIN3Q8N8D7 197 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 OR13C5Q8NGS8 318 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 OR1L1Q8NH94 360 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 MUC7Q8TAX7 377 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 GHSRQ92847 366 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 MUL1Q969V5 352 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 ORAI1Q96D31 301 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 ASCL2Q99929 193 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 ZNF251Q9BRH9 671 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 CST11Q9H112 138 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 GNB4Q9HAV0 340 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 TAF9BQ9HBM6 251 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 OR2S2Q9NQN1 319 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 PARP11Q9NR21 331 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 KCNIP1Q9NZI2 227 aa8.46□□□□□ -1.06
USP1-204ENST00000452143 DIMT1Q9UNQ2 313 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms