RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 GNG12Q9UBI6 72 aa15.36■□□□□ 0.05
USP40-207ENST00000450940 DNAH3Q8TD57 4116 aa15.35■□□□□ 0.05
USP40-207ENST00000450940 RGS10O43665 173 aa15.35■□□□□ 0.05
USP40-207ENST00000450940 MPIG6BO95866 241 aa15.35■□□□□ 0.05
USP40-207ENST00000450940 CRHBPP24387 322 aa15.35■□□□□ 0.05
USP40-207ENST00000450940 MORN2Q502X0 79 aa15.35■□□□□ 0.05
USP40-207ENST00000450940 LY6G6FQ5SQ64 297 aa15.35■□□□□ 0.05
USP40-207ENST00000450940 OR10K2Q6IF99 312 aa15.35■□□□□ 0.05
USP40-207ENST00000450940 TMEM91Q6ZNR0 172 aa15.35■□□□□ 0.05
USP40-207ENST00000450940 OR2T10Q8NGZ9 312 aa15.35■□□□□ 0.05
USP40-207ENST00000450940 UFD1Q92890 307 aa15.35■□□□□ 0.05
USP40-207ENST00000450940 TM2D1Q9BX74 207 aa15.35■□□□□ 0.05
USP40-207ENST00000450940 TMEM14DPA8MWL7 114 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 TXNL1O43396 289 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 HTR2CP28335 458 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 HTD2P86397 168 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 UNC119Q13432 240 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 TRAM1Q15629 374 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 PRSS48Q7RTY5 328 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 TGIF2LXQ8IUE1 241 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 OR6M1Q8NGM8 313 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 NEDD4LQ96PU5 975 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 SULT4A1Q9BR01 284 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 TMEM59Q9BXS4 323 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 VCX3BQ9H321 246 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 OR2S2Q9NQN1 319 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 PLSCR3Q9NRY6 295 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 KCNIP1Q9NZI2 227 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 LRRC42Q9Y546 428 aa15.34■□□□□ 0.05
USP40-207ENST00000450940 IGHV3-72A0A0B4J1Y9 119 aa15.33■□□□□ 0.04
USP40-207ENST00000450940 A0A1W2PRX2 142 aa15.33■□□□□ 0.04
USP40-207ENST00000450940 PSMB11A5LHX3 300 aa15.33■□□□□ 0.04
USP40-207ENST00000450940 BPNT1O95861 308 aa15.33■□□□□ 0.04
USP40-207ENST00000450940 CPEP16870 476 aa15.33■□□□□ 0.04
USP40-207ENST00000450940 PSMA1P25786 263 aaKnown RBP15.33■□□□□ 0.04
USP40-207ENST00000450940 MLLT11Q13015 90 aaPredicted RBP15.33■□□□□ 0.04
USP40-207ENST00000450940 OXLD1Q5BKU9 147 aa15.33■□□□□ 0.04
USP40-207ENST00000450940 PRR18Q8N4B5 295 aa15.33■□□□□ 0.04
USP40-207ENST00000450940 OR10V1Q8NGI7 309 aa15.33■□□□□ 0.04
USP40-207ENST00000450940 CHPT1Q8WUD6 406 aa15.33■□□□□ 0.04
USP40-207ENST00000450940 TMEM203Q969S6 136 aa15.33■□□□□ 0.04
USP40-207ENST00000450940 GFI1Q99684 422 aa15.33■□□□□ 0.04
USP40-207ENST00000450940 JPT1Q9UK76 154 aa15.33■□□□□ 0.04
USP40-207ENST00000450940 LANCL1O43813 399 aa15.32■□□□□ 0.04
USP40-207ENST00000450940 MOSP00540 346 aa15.32■□□□□ 0.04
USP40-207ENST00000450940 SLC35E3Q7Z769 313 aa15.32■□□□□ 0.04
USP40-207ENST00000450940 Q8N9W7 124 aa15.32■□□□□ 0.04
USP40-207ENST00000450940 OR8H1Q8NGG4 311 aa15.32■□□□□ 0.04
USP40-207ENST00000450940 FAAP24Q9BTP7 215 aa15.32■□□□□ 0.04
USP40-207ENST00000450940 ABCG5Q9H222 651 aa15.32■□□□□ 0.04
USP40-207ENST00000450940 LIN7CQ9NUP9 197 aaKnown RBP15.32■□□□□ 0.04
USP40-207ENST00000450940 ZNF736B4DX44 427 aaPredicted RBP15.31■□□□□ 0.04
USP40-207ENST00000450940 SLC17A2O00624 439 aa15.31■□□□□ 0.04
USP40-207ENST00000450940 YPEL1O60688 119 aa15.31■□□□□ 0.04
USP40-207ENST00000450940 NAPSAO96009 420 aa15.31■□□□□ 0.04
USP40-207ENST00000450940 HSMCR30P0CW71 290 aa15.31■□□□□ 0.04
USP40-207ENST00000450940 HSPA13P48723 471 aa15.31■□□□□ 0.04
USP40-207ENST00000450940 RPS25P62851 125 aaKnown RBP15.31■□□□□ 0.04
USP40-207ENST00000450940 HMGN3Q15651 99 aa15.31■□□□□ 0.04
USP40-207ENST00000450940 NKAPLQ5M9Q1 402 aa15.31■□□□□ 0.04
USP40-207ENST00000450940 ZNF880Q6PDB4 577 aa15.31■□□□□ 0.04
USP40-207ENST00000450940 REC114Q7Z4M0 266 aa15.31■□□□□ 0.04
USP40-207ENST00000450940 C6orf201Q7Z4U5 140 aa15.31■□□□□ 0.04
USP40-207ENST00000450940 C5orf24Q7Z6I8 188 aa15.31■□□□□ 0.04
USP40-207ENST00000450940 FAM89BQ8N5H3 189 aa15.31■□□□□ 0.04
USP40-207ENST00000450940 OR52L2PQ8NGH6 319 aa15.31■□□□□ 0.04
USP40-207ENST00000450940 NOL4LQ96MY1 436 aaPredicted RBP15.31■□□□□ 0.04
USP40-207ENST00000450940 YPEL2Q96QA6 119 aa15.31■□□□□ 0.04
USP40-207ENST00000450940 MGLLQ99685 303 aa15.31■□□□□ 0.04
USP40-207ENST00000450940 NICN1Q9BSH3 213 aa15.31■□□□□ 0.04
USP40-207ENST00000450940 A0A0A6YYD4 124 aa15.3■□□□□ 0.04
USP40-207ENST00000450940 LINC01548A6NM66 108 aa15.3■□□□□ 0.04
USP40-207ENST00000450940 SERPINE3A8MV23 424 aa15.3■□□□□ 0.04
USP40-207ENST00000450940 ARL6IP5O75915 188 aa15.3■□□□□ 0.04
USP40-207ENST00000450940 PF4V1P10720 104 aa15.3■□□□□ 0.04
USP40-207ENST00000450940 GNMTQ14749 295 aa15.3■□□□□ 0.04
USP40-207ENST00000450940 IZUMO2Q6UXV1 221 aa15.3■□□□□ 0.04
USP40-207ENST00000450940 Q6ZPA2 131 aa15.3■□□□□ 0.04
USP40-207ENST00000450940 OR2W3Q7Z3T1 314 aa15.3■□□□□ 0.04
USP40-207ENST00000450940 ZNF329Q86UD4 541 aa15.3■□□□□ 0.04
USP40-207ENST00000450940 ODF3L1Q8IXM7 274 aa15.3■□□□□ 0.04
USP40-207ENST00000450940 COMMD1Q8N668 190 aa15.3■□□□□ 0.04
USP40-207ENST00000450940 GALMQ96C23 342 aa15.3■□□□□ 0.04
USP40-207ENST00000450940 S1PR3Q99500 378 aa15.3■□□□□ 0.04
USP40-207ENST00000450940 LPAR5Q9H1C0 372 aa15.3■□□□□ 0.04
USP40-207ENST00000450940 KCNK15Q9H427 330 aa15.3■□□□□ 0.04
USP40-207ENST00000450940 TRBV6-6A0A0A6YYG2 114 aa15.29■□□□□ 0.04
USP40-207ENST00000450940 NCBP2LA6PVI3 153 aaKnown RBP15.29■□□□□ 0.04
USP40-207ENST00000450940 RRP9O43818 475 aaKnown RBP15.29■□□□□ 0.04
USP40-207ENST00000450940 CD33P20138 364 aa15.29■□□□□ 0.04
USP40-207ENST00000450940 BLVRBP30043 206 aaPredicted RBP15.29■□□□□ 0.04
USP40-207ENST00000450940 PPP1CCP36873 323 aaKnown RBP15.29■□□□□ 0.04
USP40-207ENST00000450940 MAP2K4P45985 399 aa15.29■□□□□ 0.04
USP40-207ENST00000450940 GPR12P47775 334 aa15.29■□□□□ 0.04
USP40-207ENST00000450940 FOXRED2Q8IWF2 684 aa15.29■□□□□ 0.04
USP40-207ENST00000450940 STPG2Q8N412 459 aa15.29■□□□□ 0.04
USP40-207ENST00000450940 SVOPQ8N4V2 548 aa15.29■□□□□ 0.04
USP40-207ENST00000450940 FAM71E2Q8N5Q1 922 aa15.29■□□□□ 0.04
USP40-207ENST00000450940 ABHD14AQ9BUJ0 271 aa15.29■□□□□ 0.04
USP40-207ENST00000450940 CCDC90BQ9GZT6 254 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms