RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 SMIM11AP58511 58 aa5.76□□□□□ -1.49
LINC01961-201ENST00000449954 SF3A3Q12874 501 aaKnown RBP eCLIP5.76□□□□□ -1.49
LINC01961-201ENST00000449954 PLGLAQ15195 96 aa5.76□□□□□ -1.49
LINC01961-201ENST00000449954 MED22Q15528 200 aa5.76□□□□□ -1.49
LINC01961-201ENST00000449954 TM4SF20Q53R12 229 aa5.76□□□□□ -1.49
LINC01961-201ENST00000449954 Q6ZSR3 168 aa5.76□□□□□ -1.49
LINC01961-201ENST00000449954 ZNF367Q7RTV3 350 aa5.76□□□□□ -1.49
LINC01961-201ENST00000449954 TMEM61Q8N0U2 210 aa5.76□□□□□ -1.49
LINC01961-201ENST00000449954 CENPSQ8N2Z9 138 aa5.76□□□□□ -1.49
LINC01961-201ENST00000449954 LFNGQ8NES3 379 aa5.76□□□□□ -1.49
LINC01961-201ENST00000449954 OR14K1Q8NGZ2 314 aa5.76□□□□□ -1.49
LINC01961-201ENST00000449954 RDH12Q96NR8 316 aa5.76□□□□□ -1.49
LINC01961-201ENST00000449954 MROQ9BYG7 248 aa5.76□□□□□ -1.49
LINC01961-201ENST00000449954 FAM118AQ9NWS6 357 aa5.76□□□□□ -1.49
LINC01961-201ENST00000449954 NDUFAF4Q9P032 175 aa5.76□□□□□ -1.49
LINC01961-201ENST00000449954 IGLV2-18A0A075B6J9 118 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 A6NIN4 97 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 C2orf70A6NJV1 201 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 FXYD1O00168 92 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 SDCBPO00560 298 aaPredicted RBP5.75□□□□□ -1.49
LINC01961-201ENST00000449954 RGS16O15492 202 aaPredicted RBP5.75□□□□□ -1.49
LINC01961-201ENST00000449954 ZNF254O75437 659 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 TRBV12-3P01733 135 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 SCTP09683 121 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 CALCBP10092 127 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 KCNJ3P48549 501 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 RBP2P50120 134 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 NUDT2P50583 147 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 ATP1B3P54709 279 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 SCN1BQ07699 218 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 UBE2V2Q15819 145 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 RNF151Q2KHN1 245 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 SAMD4BQ5PRF9 694 aaKnown RBP5.75□□□□□ -1.49
LINC01961-201ENST00000449954 ZNF57Q68EA5 555 aaPredicted RBP5.75□□□□□ -1.49
LINC01961-201ENST00000449954 OR2T33Q8NG76 320 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 GNPDA2Q8TDQ7 276 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 ZNF503Q96F45 646 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 USMG5Q96IX5 58 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 EBF4Q9BQW3 602 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 FAM103A1Q9BTL3 118 aaKnown RBP5.75□□□□□ -1.49
LINC01961-201ENST00000449954 NDUFAF3Q9BU61 184 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 TMEM109Q9BVC6 243 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 CHST5Q9GZS9 411 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 SPAG4Q9NPE6 437 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 IL20Q9NYY1 176 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 LAMP5Q9UJQ1 280 aa5.75□□□□□ -1.49
LINC01961-201ENST00000449954 RRHO14718 337 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 DEGS1O15121 323 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 SELENOFO60613 162 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 APOL3O95236 402 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 GADD45GO95257 159 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 SERPINA3P01011 423 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 IFNA21P01568 189 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 IFNA17P01571 189 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 CD74P04233 296 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 ALOX5APP20292 161 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 GZMHP20718 246 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 FCGR2BP31994 310 aaPredicted RBP5.74□□□□□ -1.49
LINC01961-201ENST00000449954 RIDAP52758 137 aaKnown RBP5.74□□□□□ -1.49
LINC01961-201ENST00000449954 PAN3Q58A45 887 aaKnown RBP5.74□□□□□ -1.49
LINC01961-201ENST00000449954 BCL2L15Q5TBC7 163 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 RSBN1Q5VWQ0 802 aaPredicted RBP5.74□□□□□ -1.49
LINC01961-201ENST00000449954 Q6P435 159 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 KCTD20Q7Z5Y7 419 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 UBE2DNLQ8IWF7 75 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 SLC38A6Q8IZM9 456 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 ANKRD42Q8N9B4 389 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 OR1L6Q8NGR2 347 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 OR13C5Q8NGS8 318 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 OR11H2Q8NH07 326 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 THRSPQ92748 146 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 ASB9Q96DX5 294 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 MAP6D1Q9H9H5 199 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 IL1RAPQ9NPH3 570 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 CMC2Q9NRP2 79 aa5.74□□□□□ -1.49
LINC01961-201ENST00000449954 TRAV25A0A0B4J276 109 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 A0A1B0GTI1 187 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 H0YJX3 145 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 BMPR1BO00238 502 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 HSPB6O14558 160 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 KDM4BO94953 1096 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 CCL1P22362 96 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 ROM1Q03395 351 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 PDZK1IP1Q13113 114 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 TMEM30BQ3MIR4 351 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 COQ5Q5HYK3 327 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 FAM209BQ5JX69 171 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 ZNF562Q6V9R5 426 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 Q6ZTC4 211 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 SPATA12Q7Z6I5 190 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 ZNF679Q8IYX0 411 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 ELMOD2Q8IZ81 293 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 LYPD1Q8N2G4 141 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 OR8D4Q8NGM9 314 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 PP6455Q8WZ26 134 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 C10orf35Q96D05 121 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 GALNT14Q96FL9 552 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 RITA1Q96K30 269 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 C7orf26Q96N11 449 aa5.73□□□□□ -1.49
LINC01961-201ENST00000449954 C6orf62Q9GZU0 229 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms