RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 PSG5Q15238 335 aa12.16□□□□□ -0.46
ITGB4-202ENST00000449880 ZNF774Q6NX45 483 aa12.16□□□□□ -0.46
ITGB4-202ENST00000449880 AMMECR1Q9Y4X0 333 aaPredicted RBP12.16□□□□□ -0.46
ITGB4-202ENST00000449880 FZD5Q13467 585 aa12.16□□□□□ -0.46
ITGB4-202ENST00000449880 Q56UQ5 140 aa12.16□□□□□ -0.46
ITGB4-202ENST00000449880 RAB1CQ92928 201 aa12.16□□□□□ -0.46
ITGB4-202ENST00000449880 GRAMD2BQ96HH9 432 aa12.16□□□□□ -0.46
ITGB4-202ENST00000449880 PSG11Q9UQ72 335 aa12.16□□□□□ -0.46
ITGB4-202ENST00000449880 CA2P00918 260 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FOLR2P14207 255 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 PRRX1P54821 245 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 POC1AQ8NBT0 407 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 VSTM2AQ8TAG5 236 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 THYN1Q9P016 225 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 PLP1P60201 277 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 ADAT3Q96EY9 351 aaPredicted RBP12.15□□□□□ -0.46
ITGB4-202ENST00000449880 PCGF1Q9BSM1 259 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 TMEM222Q9H0R3 208 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 LCTP09848 1927 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FAM90A26D6RGX4 464 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 EML2O95834 649 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 MRPL54Q6P161 138 aaKnown RBP12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FDX2Q6P4F2 183 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 CCL28Q9NRJ3 127 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 GLRX2Q9NS18 164 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 DCAF16Q9NXF7 216 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 R4GN57 208 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 PTPRFP10586 1907 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 KNL1Q8NG31 2342 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 A0A1W2PQF6 199 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FAM90A10PA6NDY2 464 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FAM90A18PA6NE21 464 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FAM90A16PA6NEW6 464 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FAM90A20PA6NIJ5 464 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FAM90A8PA6NJQ4 464 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FAM90A7PA6NKC0 464 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FAM90A22PA8MWA6 464 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FAM90A12PA8MX19 464 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FAM90A5PA8MXJ8 464 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FAM90A23PA8MXZ1 464 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 LINC00587B1AMM8 73 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 UBE2CO00762 179 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FCGR3AP08637 254 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FAM90A15PP0C7V4 464 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FAM90A13PP0C7W8 464 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FAM90A14PP0C7W9 464 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FAM90A24PP0C7X0 464 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 KLF3P57682 345 aaPredicted RBP12.15□□□□□ -0.46
ITGB4-202ENST00000449880 RND3P61587 244 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 FNDC7Q5VTL7 733 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 OR4P4Q8NGL7 312 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 OR1L1Q8NH94 360 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 PIPOXQ9P0Z9 390 aa12.15□□□□□ -0.46
ITGB4-202ENST00000449880 hADV38S2A0JD32 116 aa12.15□□□□□ -0.47
ITGB4-202ENST00000449880 VENTXO95231 258 aa12.15□□□□□ -0.47
ITGB4-202ENST00000449880 AMY1AP04745 511 aa12.15□□□□□ -0.47
ITGB4-202ENST00000449880 LCN2P80188 198 aa12.15□□□□□ -0.47
ITGB4-202ENST00000449880 FAM60AQ9NP50 221 aa12.15□□□□□ -0.47
ITGB4-202ENST00000449880 PNLIPP16233 465 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 TNFAIP6P98066 277 aaPredicted RBP12.14□□□□□ -0.47
ITGB4-202ENST00000449880 VASH2Q86V25 355 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 TMEM116Q8NCL8 245 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 PCOLCE2Q9UKZ9 415 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 ZNF638Q14966 1978 aaKnown RBP12.14□□□□□ -0.47
ITGB4-202ENST00000449880 A0A0U1RQV5 110 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 BTF3P20290 206 aaKnown RBP12.14□□□□□ -0.47
ITGB4-202ENST00000449880 OR10D3Q8NH80 312 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 CBLN4Q9NTU7 201 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 SPINT1O43278 529 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 RBP4P02753 201 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 FAM157CP0CG43 387 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 HES3Q5TGS1 186 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 SMRP1Q8NCR6 262 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 NFAM1Q8NET5 270 aaPredicted RBP12.14□□□□□ -0.47
ITGB4-202ENST00000449880 PRNDQ9UKY0 176 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 ZNF236Q9UL36 1845 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 SHISA8B8ZZ34 492 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 OR2J3O76001 311 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 PRSS1P07477 247 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 HINT1P49773 126 aaPredicted RBP12.14□□□□□ -0.47
ITGB4-202ENST00000449880 SIGLEC14Q08ET2 396 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 SLC25A34Q6PIV7 304 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 TEPPQ6URK8 271 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.14□□□□□ -0.47
ITGB4-202ENST00000449880 CXorf67Q86X51 503 aaPredicted RBP12.14□□□□□ -0.47
ITGB4-202ENST00000449880 APCDD1LQ8NCL9 501 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 SMIM8Q96KF7 97 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 OR6C3Q9NZP0 311 aa12.14□□□□□ -0.47
ITGB4-202ENST00000449880 A0A1B0GV72 72 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 TMEM238LA0A1B0GVL6 79 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 A6NJY4 79 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 H0YL77 283 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 TCL1AP56279 114 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 TGIF2LYQ8IUE0 185 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 ZNF519Q8TB69 540 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 SEBOXQ9HB31 216 aaPredicted RBP12.13□□□□□ -0.47
ITGB4-202ENST00000449880 KLHDC2Q9Y2U9 406 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 ASAH2BP0C7U1 165 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 PEBP1P30086 187 aaKnown RBP12.13□□□□□ -0.47
ITGB4-202ENST00000449880 CBLN3Q6UW01 205 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms