RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 OR2S2Q9NQN1 319 aa12.11□□□□□ -0.47
CHD3-205ENST00000449744 VSIG8P0DPA2 414 aa12.1□□□□□ -0.47
CHD3-205ENST00000449744 MYF6P23409 242 aa12.1□□□□□ -0.47
CHD3-205ENST00000449744 HTR2CP28335 458 aa12.1□□□□□ -0.47
CHD3-205ENST00000449744 CD1BP29016 333 aa12.1□□□□□ -0.47
CHD3-205ENST00000449744 GP2P55259 537 aaKnown RBP12.1□□□□□ -0.47
CHD3-205ENST00000449744 IRF3Q14653 427 aa12.1□□□□□ -0.47
CHD3-205ENST00000449744 CT45A1Q5HYN5 189 aa12.1□□□□□ -0.47
CHD3-205ENST00000449744 STEAP3Q658P3 488 aa12.1□□□□□ -0.47
CHD3-205ENST00000449744 OR10K2Q6IF99 312 aa12.1□□□□□ -0.47
CHD3-205ENST00000449744 REC114Q7Z4M0 266 aa12.1□□□□□ -0.47
CHD3-205ENST00000449744 ZNF554Q86TJ5 538 aa12.1□□□□□ -0.47
CHD3-205ENST00000449744 ZNF329Q86UD4 541 aa12.1□□□□□ -0.47
CHD3-205ENST00000449744 ZNF439Q8NDP4 499 aa12.1□□□□□ -0.47
CHD3-205ENST00000449744 CT45A3Q8NHU0 189 aa12.1□□□□□ -0.47
CHD3-205ENST00000449744 KCNG3Q8TAE7 436 aa12.1□□□□□ -0.47
CHD3-205ENST00000449744 MRPL30Q8TCC3 161 aaKnown RBP12.1□□□□□ -0.47
CHD3-205ENST00000449744 TMEM203Q969S6 136 aa12.1□□□□□ -0.47
CHD3-205ENST00000449744 NOL4LQ96MY1 436 aaPredicted RBP12.1□□□□□ -0.47
CHD3-205ENST00000449744 MBNL3Q9NUK0 354 aaKnown RBP12.1□□□□□ -0.47
CHD3-205ENST00000449744 MOSP00540 346 aa12.09□□□□□ -0.47
CHD3-205ENST00000449744 IGHG2P01859 326 aa12.09□□□□□ -0.47
CHD3-205ENST00000449744 PRB2P02812 416 aaPredicted RBP12.09□□□□□ -0.47
CHD3-205ENST00000449744 UCHL1P09936 223 aa12.09□□□□□ -0.47
CHD3-205ENST00000449744 ZNF134P52741 427 aa12.09□□□□□ -0.47
CHD3-205ENST00000449744 ZNF137PP52743 207 aa12.09□□□□□ -0.47
CHD3-205ENST00000449744 RPS27AP62979 156 aaKnown RBP12.09□□□□□ -0.47
CHD3-205ENST00000449744 TRAM1Q15629 374 aa12.09□□□□□ -0.47
CHD3-205ENST00000449744 MORN2Q502X0 79 aa12.09□□□□□ -0.47
CHD3-205ENST00000449744 WFDC9Q8NEX5 89 aa12.09□□□□□ -0.47
CHD3-205ENST00000449744 OR52L2PQ8NGH6 319 aa12.09□□□□□ -0.47
CHD3-205ENST00000449744 OR6M1Q8NGM8 313 aa12.09□□□□□ -0.47
CHD3-205ENST00000449744 ANKRD60Q9BZ19 345 aa12.09□□□□□ -0.47
CHD3-205ENST00000449744 DUSP21Q9H596 190 aa12.09□□□□□ -0.47
CHD3-205ENST00000449744 LIN7CQ9NUP9 197 aaKnown RBP12.09□□□□□ -0.47
CHD3-205ENST00000449744 LINC00527Q9UJ94 153 aa12.09□□□□□ -0.47
CHD3-205ENST00000449744 JPT1Q9UK76 154 aa12.09□□□□□ -0.47
CHD3-205ENST00000449744 LRRC42Q9Y546 428 aa12.09□□□□□ -0.47
CHD3-205ENST00000449744 SLC22A1O15245 554 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 ARL6IP5O75915 188 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 RGS11O94810 467 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 BPNT1O95861 308 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 IGLL1P15814 213 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 PSMA1P25786 263 aaKnown RBP12.08□□□□□ -0.48
CHD3-205ENST00000449744 CHATP28329 748 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 HTD2P86397 168 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 C6orf201Q7Z4U5 140 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 COMMD1Q8N668 190 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 Q8N6K4 173 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 OR51D1Q8NGF3 324 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 OR8H1Q8NGG4 311 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 PHF21AQ96BD5 680 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 GALMQ96C23 342 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 RASL11BQ9BPW5 248 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 SULT4A1Q9BR01 284 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 FAAP24Q9BTP7 215 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 ABHD14AQ9BUJ0 271 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 ABCG5Q9H222 651 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 PLGRKTQ9HBL7 147 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 CHMP1AQ9HD42 196 aaPredicted RBP12.08□□□□□ -0.48
CHD3-205ENST00000449744 ISYNA1Q9NPH2 558 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 NECAP2Q9NVZ3 263 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 ABRACLQ9P1F3 81 aa12.08□□□□□ -0.48
CHD3-205ENST00000449744 ZNF736B4DX44 427 aaPredicted RBP12.07□□□□□ -0.48
CHD3-205ENST00000449744 AP4M1O00189 453 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 LANCL1O43813 399 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 YPEL1O60688 119 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 BLVRBP30043 206 aaPredicted RBP12.07□□□□□ -0.48
CHD3-205ENST00000449744 PPP1CCP36873 323 aaKnown RBP12.07□□□□□ -0.48
CHD3-205ENST00000449744 HSPA13P48723 471 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 RPS25P62851 125 aaKnown RBP12.07□□□□□ -0.48
CHD3-205ENST00000449744 MLLT11Q13015 90 aaPredicted RBP12.07□□□□□ -0.48
CHD3-205ENST00000449744 TPBGQ13641 420 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 GNMTQ14749 295 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 PRSS48Q7RTY5 328 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 STPG2Q8N412 459 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 Q8N9W7 124 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 SETD6Q8TBK2 473 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 CYYR1Q96J86 154 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 YPEL2Q96QA6 119 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 S1PR3Q99500 378 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 NICN1Q9BSH3 213 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 URM1Q9BTM9 101 aaKnown RBP12.07□□□□□ -0.48
CHD3-205ENST00000449744 TM2D1Q9BX74 207 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 GON7Q9BXV9 100 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 KCNK15Q9H427 330 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 PLEKHJ1Q9NW61 149 aa12.07□□□□□ -0.48
CHD3-205ENST00000449744 TMEM14DPA8MWL7 114 aa12.06□□□□□ -0.48
CHD3-205ENST00000449744 NUDT19A8MXV4 375 aa12.06□□□□□ -0.48
CHD3-205ENST00000449744 ARSBP15848 533 aa12.06□□□□□ -0.48
CHD3-205ENST00000449744 CPEP16870 476 aa12.06□□□□□ -0.48
CHD3-205ENST00000449744 CRHBPP24387 322 aa12.06□□□□□ -0.48
CHD3-205ENST00000449744 RANBP1P43487 201 aa12.06□□□□□ -0.48
CHD3-205ENST00000449744 GPR12P47775 334 aa12.06□□□□□ -0.48
CHD3-205ENST00000449744 RPL23AP62750 156 aaKnown RBP12.06□□□□□ -0.48
CHD3-205ENST00000449744 UNC119Q13432 240 aa12.06□□□□□ -0.48
CHD3-205ENST00000449744 P2RY14Q15391 338 aa12.06□□□□□ -0.48
CHD3-205ENST00000449744 IZUMO2Q6UXV1 221 aa12.06□□□□□ -0.48
CHD3-205ENST00000449744 TMEM91Q6ZNR0 172 aa12.06□□□□□ -0.48
CHD3-205ENST00000449744 C5orf24Q7Z6I8 188 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms