RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 LCN12Q6JVE5 192 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 TEX38Q6PEX7 206 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 SIAH3Q8IW03 269 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 BLNKQ8WV28 456 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 ACY3Q96HD9 319 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 SMR3AQ99954 134 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 PRSS27Q9BQR3 290 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 MUC4Q99102 2169 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 BMPR1BO00238 502 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 WISP3O95389 354 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 NPBWR2P48146 333 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 CMC4P56277 68 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZP1P60852 638 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 H3F3AP84243 136 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 DGCR2P98153 550 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR9G1Q8NH87 305 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 WDFY2Q96P53 400 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 WDR13Q9H1Z4 485 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 SLC35D1Q9NTN3 355 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZFP57Q9NU63 452 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 RASL12Q9NYN1 266 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 EXTL2Q9UBQ6 330 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 PSG11Q9UQ72 335 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 STRAPQ9Y3F4 350 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 A0A1W2PQL4 384 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 BPIFB3P59826 476 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 HNRNPA0Q13151 305 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 NEUROG1Q92886 237 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 KCNIP2Q9NS61 270 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 UGT2A1Q9Y4X1 527 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 TSSC4Q9Y5U2 329 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 SMAD5-AS1Q9Y6J3 95 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF716A6NP11 495 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 H3BMQ9 156 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF354AO60765 605 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 TFAP2AP05549 437 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 HLA-GP17693 338 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 MPV17P39210 176 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 GK2Q14410 553 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 C10orf128Q5T292 105 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 Q6ZRG5 221 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZFP82Q8N141 532 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 LRRC75A-AS1Q8N1F1 130 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF439Q8NDP4 499 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 SLC26A10Q8NG04 563 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR10Z1Q8NGY1 313 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR14A2Q96R54 314 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 TMEM147Q9BVK8 224 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 IGHV4-30-2A0A087WSY4 118 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 TRAV9-2A0A087WT02 112 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 SNURFLB1AK76 121 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 E7EQL1 145 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 DCTN6O00399 190 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 UBE2L6O14933 153 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 CD5LO43866 347 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR10J4P0C629 311 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 RAB5AP20339 215 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 NPBWR1P48145 328 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 PCP4P48539 62 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 LDLRAD2Q5SZI1 272 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR51H1Q8NH63 302 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 WNT5BQ9H1J7 359 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 ISG20L2Q9H9L3 353 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 PATZ1Q9HBE1 687 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 CACFD1Q9UGQ2 172 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 STUB1Q9UNE7 303 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 TIMM9Q9Y5J7 89 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 CEACAM18A8MTB9 384 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 AQP4P55087 323 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 KISS1Q15726 138 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR2G6Q5TZ20 316 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 EIF5AL1Q6IS14 154 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR8B12Q8NGG6 310 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR51I2Q9H344 312 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 AAMDCQ9H7C9 122 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 FAM221AA4D161 298 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 NPIPB13A6NJU9 1138 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 NPIPB4C9JG80 1138 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 K7N7A8 449 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 CLDN1O95832 211 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 EVX1P49640 407 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 HCCSP53701 268 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 SRSF2Q01130 221 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF415Q09FC8 603 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR4C5Q8NGB2 326 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 FAM3DQ96BQ1 224 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 NRIP2Q9BQI9 281 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 DCSTAMPQ9H295 470 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 FKBP11Q9NYL4 201 aa4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 METTL1Q9UBP6 276 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-209ENST00000448940 GPR137BO60478 399 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR8U9P0C7N5 309 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 ASAH2BP0C7U1 165 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 PRTN3P24158 256 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 COL10A1Q03692 680 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 SYT6Q5T7P8 510 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 DGAT2L7PQ6IED9 249 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 GBGT1Q8N5D6 347 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR8U1Q8NH10 309 aa4.77□□□□□ -1.65
CDC42BPA-209ENST00000448940 Q8WTZ3 238 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms