RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 SMDT1Q9H4I9 107 aa3.43□□□□□ -1.86
PTPN12-208ENST00000447995 ZMAT4Q9H898 229 aa3.43□□□□□ -1.86
PTPN12-208ENST00000447995 PLEKHF2Q9H8W4 249 aa3.43□□□□□ -1.86
PTPN12-208ENST00000447995 LIN7CQ9NUP9 197 aaKnown RBP3.43□□□□□ -1.86
PTPN12-208ENST00000447995 UQCC1Q9NVA1 299 aa3.43□□□□□ -1.86
PTPN12-208ENST00000447995 DLL3Q9NYJ7 618 aa3.43□□□□□ -1.86
PTPN12-208ENST00000447995 KCNIP1Q9NZI2 227 aa3.43□□□□□ -1.86
PTPN12-208ENST00000447995 COQ3Q9NZJ6 369 aa3.43□□□□□ -1.86
PTPN12-208ENST00000447995 ZNF581Q9P0T4 197 aa3.43□□□□□ -1.86
PTPN12-208ENST00000447995 SPRR3Q9UBC9 169 aa3.43□□□□□ -1.86
PTPN12-208ENST00000447995 CLCF1Q9UBD9 225 aa3.43□□□□□ -1.86
PTPN12-208ENST00000447995 NDRG3Q9UGV2 375 aa3.43□□□□□ -1.86
PTPN12-208ENST00000447995 AMDHD2Q9Y303 409 aa3.43□□□□□ -1.86
PTPN12-208ENST00000447995 OR2W1Q9Y3N9 320 aa3.43□□□□□ -1.86
PTPN12-208ENST00000447995 LIPGQ9Y5X9 500 aa3.43□□□□□ -1.86
PTPN12-208ENST00000447995 KPTNQ9Y664 436 aa3.43□□□□□ -1.86
PTPN12-208ENST00000447995 SDK2Q58EX2 2172 aa3.43□□□□□ -1.86
PTPN12-208ENST00000447995 NCOA6Q14686 2063 aaPredicted RBP3.43□□□□□ -1.86
PTPN12-208ENST00000447995 TRAV24A0A0B4J272 114 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 A0A1B0GU03 582 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 TMEM30CPA0ZSE6 113 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 NKX2-6A6NCS4 301 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 AHRRA9YTQ3 701 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 RNASEK-C17orf49H0YIS7 233 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 H7C2Y5 167 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 DNASE2O00115 360 aaPredicted RBP3.42□□□□□ -1.86
PTPN12-208ENST00000447995 HS3ST1O14792 307 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 ADAM20O43506 726 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 PGLYRP1O75594 196 aaPredicted RBP3.42□□□□□ -1.86
PTPN12-208ENST00000447995 SCAF4O95104 1147 aaKnown RBP3.42□□□□□ -1.86
PTPN12-208ENST00000447995 HBE1P02100 147 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 PRH1P02810 166 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 SCTP09683 121 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 OR8U9P0C7N5 309 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 DANCRP0C864 163 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 PGA5P0DJD9 388 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 SPP1P10451 314 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 RCC1P18754 421 aaPredicted RBP3.42□□□□□ -1.86
PTPN12-208ENST00000447995 COX5AP20674 150 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 IGHV1-2P23083 117 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 F2RP25116 425 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 GCH1P30793 250 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 LPAR6P43657 344 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 IDH3GP51553 393 aaPredicted RBP3.42□□□□□ -1.86
PTPN12-208ENST00000447995 CCL11P51671 97 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 UCP2P55851 309 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 RPL23AP62750 156 aaKnown RBP3.42□□□□□ -1.86
PTPN12-208ENST00000447995 FLI1Q01543 452 aaPredicted RBP3.42□□□□□ -1.86
PTPN12-208ENST00000447995 HERPUD1Q15011 391 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 DAZAP2Q15038 168 aaPredicted RBP3.42□□□□□ -1.86
PTPN12-208ENST00000447995 ZNF146Q15072 292 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 P2RY6Q15077 328 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 TSC22D1Q15714 1073 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 MSMO1Q15800 293 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 MST1LQ2TV78 715 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 ZNF718Q3SXZ3 478 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 NMSQ5H8A3 153 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 ATP1A1-AS1Q5TC04 95 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 Q6P435 159 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 TRAT1Q6PIZ9 186 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 UNQ6494/PRO21346Q6UXR6 183 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 DPPA3Q6W0C5 159 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 ZNF497Q6ZNH5 498 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 ZNF818PQ6ZRF7 136 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 FAM219AQ8IW50 185 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 BATF2Q8N1L9 274 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 ZADH2Q8N4Q0 377 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 TCTEX1D1Q8N7M0 179 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 CNEP1R1Q8N9A8 125 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 BOLLQ8N9W6 283 aaKnown RBP3.42□□□□□ -1.86
PTPN12-208ENST00000447995 SCCPDHQ8NBX0 429 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 ZBTB34Q8NCN2 500 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 DEFB124Q8NES8 71 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 OR1J1Q8NGS3 322 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 LYPD6BQ8NI32 183 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 FAM216AQ8WUB2 273 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 LSM10Q969L4 123 aaKnown RBP3.42□□□□□ -1.86
PTPN12-208ENST00000447995 ERGIC1Q969X5 290 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 CYYR1Q96J86 154 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 TRIB1Q96RU8 372 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 RAB40CQ96S21 281 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 AIFM2Q9BRQ8 373 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 SMIM3Q9BZL3 60 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 OR2J1Q9GZK6 312 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 MS4A7Q9GZW8 240 aaPredicted RBP3.42□□□□□ -1.86
PTPN12-208ENST00000447995 CXXC4Q9H2H0 198 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 UNKLQ9H9P5 680 aaKnown RBP3.42□□□□□ -1.86
PTPN12-208ENST00000447995 CCL28Q9NRJ3 127 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 LYRM2Q9NU23 88 aaPredicted RBP3.42□□□□□ -1.86
PTPN12-208ENST00000447995 TAAR3PQ9P1P4 343 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 PURGQ9UJV8 347 aaKnown RBP3.42□□□□□ -1.86
PTPN12-208ENST00000447995 TRAPPC2LQ9UL33 140 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 PROCRQ9UNN8 238 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 WIPI2Q9Y4P8 454 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 RBM7Q9Y580 266 aaKnown RBP3.42□□□□□ -1.86
PTPN12-208ENST00000447995 WDR87Q6ZQQ6 2873 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 NCKAP5O14513 1909 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 LAMA1P25391 3075 aa3.42□□□□□ -1.86
PTPN12-208ENST00000447995 TNRC6AQ8NDV7 1962 aaKnown RBP3.42□□□□□ -1.86
PTPN12-208ENST00000447995 MED12Q93074 2177 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms