RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 AKR1E2Q96JD6 320 aa13.23□□□□□ -0.29
SF3A1-204ENST00000447376 BCL7BQ9BQE9 202 aa13.23□□□□□ -0.29
SF3A1-204ENST00000447376 PECRQ9BY49 303 aa13.23□□□□□ -0.29
SF3A1-204ENST00000447376 GNG12Q9UBI6 72 aa13.23□□□□□ -0.29
SF3A1-204ENST00000447376 MGAT4AQ9UM21 535 aa13.23□□□□□ -0.29
SF3A1-204ENST00000447376 TCF19Q9Y242 345 aa13.23□□□□□ -0.29
SF3A1-204ENST00000447376 RNF114Q9Y508 228 aa13.23□□□□□ -0.29
SF3A1-204ENST00000447376 FOXI3A8MTJ6 420 aaPredicted RBP13.22□□□□□ -0.29
SF3A1-204ENST00000447376 CD3GP09693 182 aa13.22□□□□□ -0.29
SF3A1-204ENST00000447376 RORCP51449 518 aa13.22□□□□□ -0.29
SF3A1-204ENST00000447376 TMBIM6P55061 237 aa13.22□□□□□ -0.29
SF3A1-204ENST00000447376 TMEM50BP56557 158 aa13.22□□□□□ -0.29
SF3A1-204ENST00000447376 PLA2G7Q13093 441 aa13.22□□□□□ -0.29
SF3A1-204ENST00000447376 TPTE2P1Q5T6R2 138 aa13.22□□□□□ -0.29
SF3A1-204ENST00000447376 BAIAP2L2Q6UXY1 529 aa13.22□□□□□ -0.29
SF3A1-204ENST00000447376 MOB1BQ7L9L4 216 aa13.22□□□□□ -0.29
SF3A1-204ENST00000447376 DYNAPQ8N1N2 210 aa13.22□□□□□ -0.29
SF3A1-204ENST00000447376 MRPL30Q8TCC3 161 aaKnown RBP13.22□□□□□ -0.29
SF3A1-204ENST00000447376 NAA50Q9GZZ1 169 aaKnown RBP13.22□□□□□ -0.29
SF3A1-204ENST00000447376 RANBP3Q9H6Z4 567 aaPredicted RBP13.22□□□□□ -0.29
SF3A1-204ENST00000447376 C12orf4Q9NQ89 552 aa13.22□□□□□ -0.29
SF3A1-204ENST00000447376 RHBDL2Q9NX52 303 aa13.22□□□□□ -0.29
SF3A1-204ENST00000447376 SPATA2Q9UM82 520 aa13.22□□□□□ -0.29
SF3A1-204ENST00000447376 PSG11Q9UQ72 335 aa13.22□□□□□ -0.29
SF3A1-204ENST00000447376 SERPINE3A8MV23 424 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 RAB27BO00194 218 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 TSPAN9O75954 239 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 IGHV3-7P01780 117 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 RAB13P51153 203 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 RELBQ01201 579 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 Q3ZCU0 254 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 C11orf88Q6PI97 169 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 Q6ZSV7 163 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 OR2T6Q8NHC8 308 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 SGMS2Q8NHU3 365 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 SETD6Q8TBK2 473 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 ACOT12Q8WYK0 555 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 AP3S1Q92572 193 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 TAF15Q92804 592 aaKnown RBP eCLIP13.21□□□□□ -0.29
SF3A1-204ENST00000447376 LEAP2Q969E1 77 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 CMSS1Q9BQ75 279 aaKnown RBP13.21□□□□□ -0.29
SF3A1-204ENST00000447376 DCSTAMPQ9H295 470 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 C16orf95Q9H693 158 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 DIABLOQ9NR28 239 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 MBNL3Q9NUK0 354 aaKnown RBP13.21□□□□□ -0.29
SF3A1-204ENST00000447376 AK3Q9UIJ7 227 aa13.21□□□□□ -0.29
SF3A1-204ENST00000447376 ANK2Q01484 3957 aa13.21□□□□□ -0.3
SF3A1-204ENST00000447376 A0A075B6Q4 140 aa13.2□□□□□ -0.3
SF3A1-204ENST00000447376 A0A0A6YYH2 397 aa13.2□□□□□ -0.3
SF3A1-204ENST00000447376 A6NJ64 397 aa13.2□□□□□ -0.3
SF3A1-204ENST00000447376 C12orf77C9JDV5 145 aa13.2□□□□□ -0.3
SF3A1-204ENST00000447376 RGS11O94810 467 aa13.2□□□□□ -0.3
SF3A1-204ENST00000447376 NAPSAO96009 420 aa13.2□□□□□ -0.3
SF3A1-204ENST00000447376 HBZP02008 142 aa13.2□□□□□ -0.3
SF3A1-204ENST00000447376 HIST1H1DP16402 221 aaKnown RBP13.2□□□□□ -0.3
SF3A1-204ENST00000447376 RCC1P18754 421 aaPredicted RBP13.2□□□□□ -0.3
SF3A1-204ENST00000447376 RAB7AP51149 207 aa13.2□□□□□ -0.3
SF3A1-204ENST00000447376 ARFRP1Q13795 201 aa13.2□□□□□ -0.3
SF3A1-204ENST00000447376 PLAC9Q5JTB6 97 aa13.2□□□□□ -0.3
SF3A1-204ENST00000447376 LINC01006Q8NI28 216 aa13.2□□□□□ -0.3
SF3A1-204ENST00000447376 TAF9BQ9HBM6 251 aa13.2□□□□□ -0.3
SF3A1-204ENST00000447376 GFOD1Q9NXC2 390 aa13.2□□□□□ -0.3
SF3A1-204ENST00000447376 TRBV6-6A0A0A6YYG2 114 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 IGHV3-43A0A0B4J1X8 118 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 C15orf65H3BRN8 121 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 PEX14O75381 377 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 FAM106CPP0CH98 169 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 IGHV3-43DP0DP04 118 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 GNB3P16520 340 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 SOX6P35712 828 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 TALDO1P37837 337 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 MOGAT2Q3SYC2 334 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 LDLRAD2Q5SZI1 272 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 MZT2AQ6P582 158 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 C16orf82Q7Z2V1 217 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 C8orf31Q8N9H6 132 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 OR5H6Q8NGV6 325 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 UBALD1Q8TB05 177 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 PIFOQ8TCI5 191 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 GALMQ96C23 342 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 S100A16Q96FQ6 103 aaKnown RBP13.19□□□□□ -0.3
SF3A1-204ENST00000447376 PRSS22Q9GZN4 317 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 OR2S2Q9NQN1 319 aa13.19□□□□□ -0.3
SF3A1-204ENST00000447376 A6NDX4 124 aa13.18□□□□□ -0.3
SF3A1-204ENST00000447376 MFNGO00587 321 aa13.18□□□□□ -0.3
SF3A1-204ENST00000447376 GAPDHP04406 335 aaKnown RBP13.18□□□□□ -0.3
SF3A1-204ENST00000447376 GSTP1P09211 210 aaKnown RBP13.18□□□□□ -0.3
SF3A1-204ENST00000447376 PITPNAQ00169 270 aa13.18□□□□□ -0.3
SF3A1-204ENST00000447376 CDNFQ49AH0 187 aa13.18□□□□□ -0.3
SF3A1-204ENST00000447376 UBE2NLQ5JXB2 153 aa13.18□□□□□ -0.3
SF3A1-204ENST00000447376 TMEM219Q86XT9 240 aa13.18□□□□□ -0.3
SF3A1-204ENST00000447376 OR8H3Q8N146 312 aa13.18□□□□□ -0.3
SF3A1-204ENST00000447376 SAMD12Q8N8I0 201 aa13.18□□□□□ -0.3
SF3A1-204ENST00000447376 WFDC12Q8WWY7 111 aa13.18□□□□□ -0.3
SF3A1-204ENST00000447376 OCSTAMPQ9BR26 566 aa13.18□□□□□ -0.3
SF3A1-204ENST00000447376 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.18□□□□□ -0.3
SF3A1-204ENST00000447376 JPT1Q9UK76 154 aa13.18□□□□□ -0.3
SF3A1-204ENST00000447376 A0A1W2PPE3 182 aa13.17□□□□□ -0.3
SF3A1-204ENST00000447376 HSD17B6O14756 317 aa13.17□□□□□ -0.3
SF3A1-204ENST00000447376 ZNF182P17025 639 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms