RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	RIPPLY2	Q5TAB7	128 aa		10.77	□□□□□ -0.69
DDR1-238	ENST00000446312	ZIC4	Q8N9L1	334 aa		10.77	□□□□□ -0.69
DDR1-238	ENST00000446312	BOD1	Q96IK1	185 aa		10.77	□□□□□ -0.69
DDR1-238	ENST00000446312	HDGFL3	Q9Y3E1	203 aa		10.77	□□□□□ -0.69
DDR1-238	ENST00000446312	GGCT	O75223	188 aa	Known RBP	10.77	□□□□□ -0.69
DDR1-238	ENST00000446312	IRF2	P14316	349 aa		10.77	□□□□□ -0.69
DDR1-238	ENST00000446312	TMEM108	Q6UXF1	575 aa		10.77	□□□□□ -0.69
DDR1-238	ENST00000446312	CXorf67	Q86X51	503 aa	Predicted RBP	10.77	□□□□□ -0.69
DDR1-238	ENST00000446312	OR1L6	Q8NGR2	347 aa		10.77	□□□□□ -0.69
DDR1-238	ENST00000446312	GATAD1	Q8WUU5	269 aa		10.77	□□□□□ -0.69
DDR1-238	ENST00000446312	FRZB	Q92765	325 aa		10.77	□□□□□ -0.69
DDR1-238	ENST00000446312	HES7	Q9BYE0	225 aa		10.77	□□□□□ -0.69
DDR1-238	ENST00000446312	PIEZO2	Q9H5I5	2752 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	IGHV5-10-1	A0A0J9YXX1	117 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	OR4A8	P0C604	315 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	ERVFC1-1	P60608	527 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	ABLIM2	Q6H8Q1	611 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	PP6455	Q8WZ26	134 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	CLUHP3	Q96NS8	147 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	NIPSNAP3B	Q9BS92	247 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	GPR87	Q9BY21	358 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	ERRFI1	Q9UJM3	462 aa	Predicted RBP	10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	TUBD1	Q9UJT1	453 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312		V9GYS6	101 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312		A0A1W2PNV4	684 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	FAM166B	A8MTA8	275 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	ZIC3	O60481	467 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	PSG2	P11465	335 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	LYL1	P12980	280 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	CD33	P20138	364 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	FUT3	P21217	361 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	RAB1A	P62820	205 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	C20orf204	Q6ZNR8	217 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	ZDHHC23	Q8IYP9	409 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	NUDT11	Q96G61	164 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	SLC25A31	Q9H0C2	315 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	ZNF576	Q9H609	170 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	C12orf49	Q9H741	205 aa		10.76	□□□□□ -0.69
DDR1-238	ENST00000446312	TUSC2	O75896	110 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	SEC11B	P0C7V7	166 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	ALDH3B1	P43353	468 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	CDKN1B	P46527	198 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	SPSB3	Q6PJ21	355 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	IL22RA1	Q8N6P7	574 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	TMEM238	C9JI98	176 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312		K7N7A8	449 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	TK1	P04183	234 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	GAPDH	P04406	335 aa	Known RBP	10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	CELA3A	P09093	270 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	TGFBR3	Q03167	851 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	SPINK14	Q6IE38	97 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	RPS19BP1	Q86WX3	136 aa	Known RBP	10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	IFI44	Q8TCB0	444 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	TMEM37	Q8WXS4	190 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	FAM234A	Q9H0X4	552 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	GPR27	Q9NS67	375 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	OR1A1	Q9P1Q5	309 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312		A0A1B0GUS0	222 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	LNP1	A1A4G5	178 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	ZNF732	B4DXR9	585 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	SIRPB1	O00241	398 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	CEBPD	P49716	269 aa	Predicted RBP	10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	KCNMB1	Q16558	191 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	FOXB1	Q99853	325 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	MED13L	Q71F56	2210 aa		10.75	□□□□□ -0.69
DDR1-238	ENST00000446312	FOXI3	A8MTJ6	420 aa	Predicted RBP	10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	SERPINE2	P07093	398 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	SRP19	P09132	144 aa	Known RBP	10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	GDF1	P27539	372 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	ZNF133	P52736	654 aa	Predicted RBP	10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	ICAM4	Q14773	271 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	ELOB	Q15370	118 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312		Q6ZRM9	215 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	MUCL1	Q96DR8	90 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	SDSL	Q96GA7	329 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	GINS3	Q9BRX5	216 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	SLC25A22	Q9H936	323 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	RPRM	Q9NS64	109 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	DVL1	O14640	695 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	PDCD6	O75340	191 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	ZNF100	Q8IYN0	542 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	ADGRG7	Q96K78	797 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	C18orf12	Q96KH6	178 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	CACNG5	Q9UF02	275 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312	CACNA1H	O95180	2353 aa		10.74	□□□□□ -0.69
DDR1-238	ENST00000446312		J3QW42	95 aa		10.73	□□□□□ -0.69
DDR1-238	ENST00000446312	TNFSF10	P50591	281 aa		10.73	□□□□□ -0.69
DDR1-238	ENST00000446312	CNN3	Q15417	329 aa	Known RBP	10.73	□□□□□ -0.69
DDR1-238	ENST00000446312	DNLZ	Q5SXM8	178 aa		10.73	□□□□□ -0.69
DDR1-238	ENST00000446312	TPRX1	Q8N7U7	411 aa		10.73	□□□□□ -0.69
DDR1-238	ENST00000446312	OR10D3	Q8NH80	312 aa		10.73	□□□□□ -0.69
DDR1-238	ENST00000446312	FBLN5	Q9UBX5	448 aa		10.73	□□□□□ -0.69
DDR1-238	ENST00000446312	UBE2L5P	A0A1B0GUS4	154 aa		10.73	□□□□□ -0.69
DDR1-238	ENST00000446312	CEACAM18	A8MTB9	384 aa		10.73	□□□□□ -0.69
DDR1-238	ENST00000446312	IDH3G	P51553	393 aa	Predicted RBP	10.73	□□□□□ -0.69
DDR1-238	ENST00000446312	UCP3	P55916	312 aa		10.73	□□□□□ -0.69
DDR1-238	ENST00000446312	UBE2G2	P60604	165 aa		10.73	□□□□□ -0.69
DDR1-238	ENST00000446312	ARL16	Q0P5N6	197 aa		10.73	□□□□□ -0.69
DDR1-238	ENST00000446312	FBXW9	Q5XUX1	488 aa		10.73	□□□□□ -0.69

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