RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 PEX16Q9Y5Y5 336 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 A0A0A6YYD4 124 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 LINC01548A6NM66 108 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 CCRL2O00421 344 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 PDCD5O14737 125 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 ORC5O43913 435 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 BPNT1O95861 308 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 MPIG6BO95866 241 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 TMEM11P17152 192 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 GALP22466 123 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 CALRP27797 417 aaKnown RBP8.61□□□□□ -1.03
SF3A1-203ENST00000444440 MNDAP41218 407 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 UNC119Q13432 240 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 UBE2UQ5VVX9 321 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 C18orf65Q6ZTR6 163 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 CENPVQ7Z7K6 275 aaPredicted RBP8.61□□□□□ -1.03
SF3A1-203ENST00000444440 THNSL2Q86YJ6 484 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 SPARTQ8N0X7 666 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 OR8H3Q8N146 312 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 PRR18Q8N4B5 295 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 LINC00311Q8N616 119 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 Q8N6K4 173 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 OR10V1Q8NGI7 309 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 OR52M1Q8NGK5 317 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 OR6M1Q8NGM8 313 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 OR10X1Q8NGY0 326 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 MRPL30Q8TCC3 161 aaKnown RBP8.61□□□□□ -1.03
SF3A1-203ENST00000444440 NEDD4LQ96PU5 975 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 NICN1Q9BSH3 213 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 NDUFB11Q9NX14 153 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 LINC00527Q9UJ94 153 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 TRAPPC2LQ9UL33 140 aa8.61□□□□□ -1.03
SF3A1-203ENST00000444440 TRAV1-2A0A0B4J238 106 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 TRDV1A0A1B0GX56 115 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 SLC17A2O00624 439 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 SLC22A1O15245 554 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 PDCD6O75340 191 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 PEX14O75381 377 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 HBZP02008 142 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 FAM106CPP0CH98 169 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 ARSBP15848 533 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 MYL9P24844 172 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 PSMB9P28065 219 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 CHATP28329 748 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 RAB7AP51149 207 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 QRFPP83859 136 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 EBI3Q14213 229 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 HES1Q14469 280 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 RAB11BQ15907 218 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 CT45A1Q5HYN5 189 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 TRAT1Q6PIZ9 186 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 ZNF773Q6PK81 442 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 SLC25A48Q6ZT89 311 aaKnown RBP8.6□□□□□ -1.03
SF3A1-203ENST00000444440 OR2W3Q7Z3T1 314 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 MOB3BQ86TA1 216 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 ZNF329Q86UD4 541 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 CT45A3Q8NHU0 189 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 RTN4IP1Q8WWV3 396 aaPredicted RBP8.6□□□□□ -1.03
SF3A1-203ENST00000444440 EAF1Q96JC9 268 aaPredicted RBP8.6□□□□□ -1.03
SF3A1-203ENST00000444440 AKR1E2Q96JD6 320 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 SULT4A1Q9BR01 284 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 URM1Q9BTM9 101 aaKnown RBP8.6□□□□□ -1.03
SF3A1-203ENST00000444440 TMEM59Q9BXS4 323 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 MBNL3Q9NUK0 354 aaKnown RBP8.6□□□□□ -1.03
SF3A1-203ENST00000444440 KCNIP1Q9NZI2 227 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 AK6Q9Y3D8 172 aaKnown RBP8.6□□□□□ -1.03
SF3A1-203ENST00000444440 V9GY05 133 aa8.6□□□□□ -1.03
SF3A1-203ENST00000444440 SPINT2O43291 252 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 RPS27AP62979 156 aaKnown RBP8.59□□□□□ -1.03
SF3A1-203ENST00000444440 SSX1Q16384 188 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 TMEM30BQ3MIR4 351 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 NKAPLQ5M9Q1 402 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 C6orf183Q5T699 404 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 CD200R1LQ6Q8B3 271 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 ETV3LQ6ZN32 361 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 C6orf201Q7Z4U5 140 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 ODF3L1Q8IXM7 274 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 IZUMO1Q8IYV9 350 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 C8orf31Q8N9H6 132 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 Q8N9W7 124 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 OR52L2PQ8NGH6 319 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 FAAP24Q9BTP7 215 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 TAF9BQ9HBM6 251 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 PLSCR3Q9NRY6 295 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 SSR3Q9UNL2 185 aa8.59□□□□□ -1.03
SF3A1-203ENST00000444440 TCRBV4S1A1TA0A5B7 111 aa8.58□□□□□ -1.04
SF3A1-203ENST00000444440 TMEM14DPA8MWL7 114 aa8.58□□□□□ -1.04
SF3A1-203ENST00000444440 GAPDHP04406 335 aaKnown RBP8.58□□□□□ -1.04
SF3A1-203ENST00000444440 IGLL1P15814 213 aa8.58□□□□□ -1.04
SF3A1-203ENST00000444440 BLVRBP30043 206 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-203ENST00000444440 PPP1CCP36873 323 aaKnown RBP8.58□□□□□ -1.04
SF3A1-203ENST00000444440 ZNF137PP52743 207 aa8.58□□□□□ -1.04
SF3A1-203ENST00000444440 F2RL1P55085 397 aa8.58□□□□□ -1.04
SF3A1-203ENST00000444440 PLA2G7Q13093 441 aa8.58□□□□□ -1.04
SF3A1-203ENST00000444440 P2RY14Q15391 338 aa8.58□□□□□ -1.04
SF3A1-203ENST00000444440 KCTD21Q4G0X4 260 aa8.58□□□□□ -1.04
SF3A1-203ENST00000444440 MORN2Q502X0 79 aa8.58□□□□□ -1.04
SF3A1-203ENST00000444440 OR4F17Q8NGA8 305 aa8.58□□□□□ -1.04
SF3A1-203ENST00000444440 PHF21AQ96BD5 680 aa8.58□□□□□ -1.04
SF3A1-203ENST00000444440 FAM3DQ96BQ1 224 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms