RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 RPS11P62280 158 aaKnown RBP eCLIP9.27□□□□□ -0.93
TTC28-203ENST00000442232 DGCR2P98153 550 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 MMDQ15546 238 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 NKAPLQ5M9Q1 402 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 C18orf65Q6ZTR6 163 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 AHSA2Q719I0 299 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 OR1L1Q8NH94 360 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 GGHQ92820 318 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 ST6GALNAC6Q969X2 333 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 RAX2Q96IS3 184 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 NEDD4LQ96PU5 975 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 DERL3Q96Q80 235 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 P2RX4Q99571 388 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 UQCC2Q9BRT2 126 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 ABHD14AQ9BUJ0 271 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 VCXQ9H320 206 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 OR2S2Q9NQN1 319 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 GHRLQ9UBU3 117 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 ERGIC3Q9Y282 383 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 LANCL1O43813 399 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 RAMP3O60896 148 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 PDCD6O75340 191 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 UBBP0CG47 229 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 RCC1P18754 421 aaPredicted RBP9.26□□□□□ -0.93
TTC28-203ENST00000442232 MYF6P23409 242 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 ZNF137PP52743 207 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 ADARB1P78563 741 aaKnown RBP9.26□□□□□ -0.93
TTC28-203ENST00000442232 LSAMPQ13449 338 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 STEAP3Q658P3 488 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 TMEM65Q6PI78 240 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 ZNF554Q86TJ5 538 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 TMEM104Q8NE00 496 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 FAM46BQ96A09 425 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 Q96M66 194 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 DUX3Q96PT4 197 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 ZNF251Q9BRH9 671 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 DCLRE1BQ9H816 532 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 TAF9BQ9HBM6 251 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 ABRACLQ9P1F3 81 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 ZNF107Q9UII5 783 aaPredicted RBP9.26□□□□□ -0.93
TTC28-203ENST00000442232 JPT1Q9UK76 154 aa9.26□□□□□ -0.93
TTC28-203ENST00000442232 LINC01548A6NM66 108 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 H0YHG0 523 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 SC5DO75845 299 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 CD1AP06126 327 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 CDX1P47902 265 aaPredicted RBP9.25□□□□□ -0.93
TTC28-203ENST00000442232 KIR2DS1Q14954 304 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 RCN1Q15293 331 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 CT45A1Q5HYN5 189 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 C9orf66Q5T8R8 295 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 FAM53AQ6NSI3 398 aaPredicted RBP9.25□□□□□ -0.93
TTC28-203ENST00000442232 LCNL1Q6ZST4 164 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 GAPTQ8N292 157 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 FAM71E2Q8N5Q1 922 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 ZNF485Q8NCK3 441 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 ZNF439Q8NDP4 499 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 BPIFB6Q8NFQ5 453 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 OR2AK2Q8NG84 335 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 CT45A3Q8NHU0 189 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 C4orf3Q8WVX3 66 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 GALMQ96C23 342 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 B9D2Q9BPU9 175 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 HSPB9Q9BQS6 159 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 CHCHD6Q9BRQ6 235 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 CHMP1AQ9HD42 196 aaPredicted RBP9.25□□□□□ -0.93
TTC28-203ENST00000442232 KIAA1456Q9P272 454 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 LRRC42Q9Y546 428 aa9.25□□□□□ -0.93
TTC28-203ENST00000442232 ZNF736B4DX44 427 aaPredicted RBP9.24□□□□□ -0.93
TTC28-203ENST00000442232 IGHG4P01861 327 aa9.24□□□□□ -0.93
TTC28-203ENST00000442232 SLC2A2P11168 524 aaPredicted RBP9.24□□□□□ -0.93
TTC28-203ENST00000442232 PPP1CCP36873 323 aaKnown RBP9.24□□□□□ -0.93
TTC28-203ENST00000442232 ZNF134P52741 427 aa9.24□□□□□ -0.93
TTC28-203ENST00000442232 HTD2P86397 168 aa9.24□□□□□ -0.93
TTC28-203ENST00000442232 GABPB1Q06547 395 aaPredicted RBP9.24□□□□□ -0.93
TTC28-203ENST00000442232 DEFB136Q30KP8 78 aa9.24□□□□□ -0.93
TTC28-203ENST00000442232 MORN2Q502X0 79 aa9.24□□□□□ -0.93
TTC28-203ENST00000442232 RBM48Q5RL73 367 aaKnown RBP9.24□□□□□ -0.93
TTC28-203ENST00000442232 GLT8D1Q68CQ7 371 aa9.24□□□□□ -0.93
TTC28-203ENST00000442232 C11orf87Q6NUJ2 197 aa9.24□□□□□ -0.93
TTC28-203ENST00000442232 OR52L2PQ8NGH6 319 aa9.24□□□□□ -0.93
TTC28-203ENST00000442232 KCTD7Q96MP8 289 aa9.24□□□□□ -0.93
TTC28-203ENST00000442232 MND1Q9BWT6 205 aa9.24□□□□□ -0.93
TTC28-203ENST00000442232 TMEM59Q9BXS4 323 aa9.24□□□□□ -0.93
TTC28-203ENST00000442232 PARP11Q9NR21 331 aa9.24□□□□□ -0.93
TTC28-203ENST00000442232 PLSCR3Q9NRY6 295 aa9.24□□□□□ -0.93
TTC28-203ENST00000442232 MBNL3Q9NUK0 354 aaKnown RBP9.24□□□□□ -0.93
TTC28-203ENST00000442232 STEAP1Q9UHE8 339 aa9.24□□□□□ -0.93
TTC28-203ENST00000442232 PSORS1C1Q9UIG5 152 aa9.24□□□□□ -0.93
TTC28-203ENST00000442232 ZNF580Q9UK33 172 aa9.24□□□□□ -0.93
TTC28-203ENST00000442232 SEC14L6B5MCN3 397 aa9.23□□□□□ -0.93
TTC28-203ENST00000442232 NBR2O15453 112 aa9.23□□□□□ -0.93
TTC28-203ENST00000442232 IGF1P05019 195 aa9.23□□□□□ -0.93
TTC28-203ENST00000442232 F2RL1P55085 397 aa9.23□□□□□ -0.93
TTC28-203ENST00000442232 ACTBP60709 375 aa9.23□□□□□ -0.93
TTC28-203ENST00000442232 GNMTQ14749 295 aa9.23□□□□□ -0.93
TTC28-203ENST00000442232 PLGLAQ15195 96 aa9.23□□□□□ -0.93
TTC28-203ENST00000442232 MOB1BQ7L9L4 216 aa9.23□□□□□ -0.93
TTC28-203ENST00000442232 MS4A15Q8N5U1 240 aa9.23□□□□□ -0.93
TTC28-203ENST00000442232 RNF152Q8N8N0 203 aa9.23□□□□□ -0.93
TTC28-203ENST00000442232 SETD6Q8TBK2 473 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms