RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 KCNK7Q9Y2U2 307 aa12.12□□□□□ -0.47
CSNK1E-210ENST00000442216 IGHV3-43A0A0B4J1X8 118 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 MFNGO00587 321 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 YPEL1O60688 119 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 RGS11O94810 467 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 CD3GP09693 182 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 IGHV3-43DP0DP04 118 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 SNRPBP14678 240 aaKnown RBP12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 HIST1H1DP16402 221 aaKnown RBP12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 MNDAP41218 407 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 ALDH3B2P48448 385 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 GNG10P50151 68 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 RAB7AP51149 207 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 RAG2P55895 527 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 MRPS15P82914 257 aaKnown RBP12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 MORN2Q502X0 79 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 IDNKQ5T6J7 187 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 SLC25A48Q6ZT89 311 aaKnown RBP12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 ANKRD13BQ86YJ7 626 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 OR8H3Q8N146 312 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 PRR18Q8N4B5 295 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 DTX3Q8N9I9 347 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 ZNF439Q8NDP4 499 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 OR10X1Q8NGY0 326 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 UBALD1Q8TB05 177 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 LGALS14Q8TCE9 139 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 YPEL2Q96QA6 119 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 Q9N2K0 584 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 SPATA2Q9UM82 520 aa12.11□□□□□ -0.47
CSNK1E-210ENST00000442216 A0A0A6YYH2 397 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 A6NDX4 124 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 A6NJ64 397 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 TSPAN9O75954 239 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 IGHV3-7P01780 117 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 IL3RAP26951 378 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 TGFBR1P36897 503 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 RPS19P39019 145 aaKnown RBP12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 ZNF137PP52743 207 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 LSM3P62310 102 aaKnown RBP12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 HLA-DRB3P79483 266 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 RELBQ01201 579 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 ZNF816Q0VGE8 651 aaPredicted RBP12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 LY6EQ16553 131 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 SRSF7Q16629 238 aaKnown RBP eCLIP12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 PLA1AQ53H76 456 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 Q6ZPA2 131 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 TOMM40LQ969M1 308 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 C16orf95Q9H693 158 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 RANBP3Q9H6Z4 567 aaPredicted RBP12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 BEX1Q9HBH7 125 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 RHBDL2Q9NX52 303 aa12.1□□□□□ -0.47
CSNK1E-210ENST00000442216 GABARAPO95166 117 aa12.09□□□□□ -0.47
CSNK1E-210ENST00000442216 TFAP2AP05549 437 aa12.09□□□□□ -0.47
CSNK1E-210ENST00000442216 LPLP06858 475 aa12.09□□□□□ -0.47
CSNK1E-210ENST00000442216 GSTP1P09211 210 aaKnown RBP12.09□□□□□ -0.47
CSNK1E-210ENST00000442216 GNB3P16520 340 aa12.09□□□□□ -0.47
CSNK1E-210ENST00000442216 RAB13P51153 203 aa12.09□□□□□ -0.47
CSNK1E-210ENST00000442216 OLFML2AQ68BL7 652 aa12.09□□□□□ -0.47
CSNK1E-210ENST00000442216 C16orf82Q7Z2V1 217 aa12.09□□□□□ -0.47
CSNK1E-210ENST00000442216 GPR141Q7Z602 305 aa12.09□□□□□ -0.47
CSNK1E-210ENST00000442216 THNSL2Q86YJ6 484 aa12.09□□□□□ -0.47
CSNK1E-210ENST00000442216 SETD6Q8TBK2 473 aa12.09□□□□□ -0.47
CSNK1E-210ENST00000442216 ST6GALNAC6Q969X2 333 aa12.09□□□□□ -0.47
CSNK1E-210ENST00000442216 SLC25A46Q96AG3 418 aa12.09□□□□□ -0.47
CSNK1E-210ENST00000442216 KCTD12Q96CX2 325 aaKnown RBP12.09□□□□□ -0.47
CSNK1E-210ENST00000442216 HDHD3Q9BSH5 251 aaPredicted RBP12.09□□□□□ -0.47
CSNK1E-210ENST00000442216 A0A1W2PPE3 182 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 A0A1W2PPI3 338 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 CLPSL1A2RUU4 121 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 FAM90A9PA6NNJ1 464 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 ITGB1BP1O14713 200 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 HSD17B6O14756 317 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 TXNL1O43396 289 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 DIRAS3O95661 229 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 GAPDHP04406 335 aaKnown RBP12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 KIR2DS4P43632 304 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 SERPINB10P48595 397 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 ZNF134P52741 427 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 PITPNAQ00169 270 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 HABP2Q14520 560 aaPredicted RBP12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 KIR2DS1Q14954 304 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 CT45A1Q5HYN5 189 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 CCBE1Q6UXH8 406 aaPredicted RBP12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 Q6ZS49 121 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 Q6ZSV7 163 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 C3orf56Q8N813 242 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 OR52L2PQ8NGH6 319 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 OR10V1Q8NGI7 309 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 OR5H6Q8NGV6 325 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 CT45A3Q8NHU0 189 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 PHF21AQ96BD5 680 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 SLC25A38Q96DW6 304 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 NPFFR1Q9GZQ6 430 aa12.08□□□□□ -0.48
CSNK1E-210ENST00000442216 TRDCB7Z8K6 153 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 CHST1O43916 411 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 FCGR3AP08637 254 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 MDKP21741 143 aaPredicted RBP12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 DTYMKP23919 212 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 VBP1P61758 197 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 NCS1P62166 190 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms