RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 COPS6Q7L5N1 327 aa1.77□□□□□ -2.13
PFDN4-202ENST00000441080 VN1R4Q7Z5H5 301 aa1.77□□□□□ -2.13
PFDN4-202ENST00000441080 C2orf73Q8N5S3 287 aaPredicted RBP1.77□□□□□ -2.13
PFDN4-202ENST00000441080 ERMNQ8TAM6 284 aa1.77□□□□□ -2.13
PFDN4-202ENST00000441080 FIS1Q9Y3D6 152 aa1.77□□□□□ -2.13
PFDN4-202ENST00000441080 COL18A1P39060 1754 aa1.77□□□□□ -2.13
PFDN4-202ENST00000441080 SORL1Q92673 2214 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 MYO15BQ96JP2 1530 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 PTPRKQ15262 1439 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 LCTP09848 1927 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 A0A1W2PQL4 384 aaPredicted RBP1.76□□□□□ -2.13
PFDN4-202ENST00000441080 FNDC10F2Z333 226 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 PHYHO14832 338 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 LIMS3P0CW19 117 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 LIMS4P0CW20 117 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 GADD45AP24522 165 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 LPAR6P43657 344 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 RWDD2BP57060 319 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 GTF2BQ00403 316 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 TTC33Q6PID6 262 aaPredicted RBP1.76□□□□□ -2.13
PFDN4-202ENST00000441080 CCDC121Q6ZUS5 278 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 DOLPP1Q86YN1 238 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 YIPF7Q8N8F6 280 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 OR5K1Q8NHB7 308 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 ANGPTL6Q8NI99 470 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 PPWD1Q96BP3 646 aaKnown RBP1.76□□□□□ -2.13
PFDN4-202ENST00000441080 HBEGFQ99075 208 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 SLC19A3Q9BZV2 496 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 CHST5Q9GZS9 411 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 GTSF1LQ9H1H1 148 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 SMDT1Q9H4I9 107 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 TMEM216Q9P0N5 145 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 MINOS1-NBL1R4GNA1 71 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 ADGRB3O60242 1522 aa1.76□□□□□ -2.13
PFDN4-202ENST00000441080 USP42Q9H9J4 1324 aaKnown RBP1.75□□□□□ -2.13
PFDN4-202ENST00000441080 IGHV3-30-3P0DP02 117 aa1.75□□□□□ -2.13
PFDN4-202ENST00000441080 SS18Q15532 418 aa1.75□□□□□ -2.13
PFDN4-202ENST00000441080 ZBTB6Q15916 424 aa1.75□□□□□ -2.13
PFDN4-202ENST00000441080 TIMM23BQ5SRD1 257 aa1.75□□□□□ -2.13
PFDN4-202ENST00000441080 TCAIMQ8N3R3 496 aa1.75□□□□□ -2.13
PFDN4-202ENST00000441080 ZNF251Q9BRH9 671 aa1.75□□□□□ -2.13
PFDN4-202ENST00000441080 CXCL16Q9H2A7 254 aa1.75□□□□□ -2.13
PFDN4-202ENST00000441080 TXNL4BQ9NX01 149 aaKnown RBP1.75□□□□□ -2.13
PFDN4-202ENST00000441080 FAM206AQ9NX38 181 aa1.75□□□□□ -2.13
PFDN4-202ENST00000441080 FBXL3Q9UKT7 428 aa1.75□□□□□ -2.13
PFDN4-202ENST00000441080 COL11A1P12107 1806 aaPredicted RBP1.75□□□□□ -2.13
PFDN4-202ENST00000441080 PTPRJQ12913 1337 aa1.74□□□□□ -2.13
PFDN4-202ENST00000441080 VPS37CA5D8V6 355 aaPredicted RBP1.74□□□□□ -2.13
PFDN4-202ENST00000441080 UGT2B11O75310 529 aa1.74□□□□□ -2.13
PFDN4-202ENST00000441080 SOD1P00441 154 aa1.74□□□□□ -2.13
PFDN4-202ENST00000441080 GP1BAP07359 652 aa1.74□□□□□ -2.13
PFDN4-202ENST00000441080 SYT1P21579 422 aa1.74□□□□□ -2.13
PFDN4-202ENST00000441080 SLC35A2P78381 396 aa1.74□□□□□ -2.13
PFDN4-202ENST00000441080 FAM3AP98173 230 aa1.74□□□□□ -2.13
PFDN4-202ENST00000441080 HES1Q14469 280 aa1.74□□□□□ -2.13
PFDN4-202ENST00000441080 MRPL51Q4U2R6 128 aaKnown RBP1.74□□□□□ -2.13
PFDN4-202ENST00000441080 TRMT12Q53H54 448 aaKnown RBP1.74□□□□□ -2.13
PFDN4-202ENST00000441080 TMIGD2Q96BF3 282 aa1.74□□□□□ -2.13
PFDN4-202ENST00000441080 TMEM56Q96MV1 263 aa1.74□□□□□ -2.13
PFDN4-202ENST00000441080 FAM210AQ96ND0 272 aa1.74□□□□□ -2.13
PFDN4-202ENST00000441080 MED18Q9BUE0 208 aa1.74□□□□□ -2.13
PFDN4-202ENST00000441080 C1QTNF6Q9BXI9 259 aa1.74□□□□□ -2.13
PFDN4-202ENST00000441080 CHMP5Q9NZZ3 219 aa1.74□□□□□ -2.13
PFDN4-202ENST00000441080 ALG5Q9Y673 324 aa1.74□□□□□ -2.13
PFDN4-202ENST00000441080 TRPM3Q9HCF6 1732 aaPredicted RBP1.74□□□□□ -2.13
PFDN4-202ENST00000441080 KIAA0232Q92628 1395 aa1.73□□□□□ -2.13
PFDN4-202ENST00000441080 H3BRN7 92 aa1.73□□□□□ -2.13
PFDN4-202ENST00000441080 ORM2P19652 201 aa1.73□□□□□ -2.13
PFDN4-202ENST00000441080 PSMB3P49720 205 aa1.73□□□□□ -2.13
PFDN4-202ENST00000441080 PSMD7P51665 324 aa1.73□□□□□ -2.13
PFDN4-202ENST00000441080 RAB8AP61006 207 aa1.73□□□□□ -2.13
PFDN4-202ENST00000441080 SYCP1Q15431 976 aa1.73□□□□□ -2.13
PFDN4-202ENST00000441080 SPERTQ8NA61 448 aa1.73□□□□□ -2.13
PFDN4-202ENST00000441080 OR10A6Q8NH74 314 aa1.73□□□□□ -2.13
PFDN4-202ENST00000441080 CCDC12Q8WUD4 166 aaPredicted RBP1.73□□□□□ -2.13
PFDN4-202ENST00000441080 MBOAT7Q96N66 472 aa1.73□□□□□ -2.13
PFDN4-202ENST00000441080 MGLLQ99685 303 aa1.73□□□□□ -2.13
PFDN4-202ENST00000441080 CDCA4Q9BXL8 241 aa1.73□□□□□ -2.13
PFDN4-202ENST00000441080 UGT2B28Q9BY64 529 aa1.73□□□□□ -2.13
PFDN4-202ENST00000441080 MUC6Q6W4X9 2439 aa1.73□□□□□ -2.13
PFDN4-202ENST00000441080 IGHV3-73A0A0B4J1V6 119 aa1.72□□□□□ -2.13
PFDN4-202ENST00000441080 MUC21A0A0G2JKD1 596 aa1.72□□□□□ -2.13
PFDN4-202ENST00000441080 MUC21A0A140T8X8 626 aa1.72□□□□□ -2.13
PFDN4-202ENST00000441080 CD200P41217 278 aa1.72□□□□□ -2.13
PFDN4-202ENST00000441080 HADHBP55084 474 aaKnown RBP1.72□□□□□ -2.13
PFDN4-202ENST00000441080 USF2Q15853 346 aaPredicted RBP1.72□□□□□ -2.13
PFDN4-202ENST00000441080 RBM48Q5RL73 367 aaKnown RBP1.72□□□□□ -2.13
PFDN4-202ENST00000441080 Q6ZS52 159 aa1.72□□□□□ -2.13
PFDN4-202ENST00000441080 OR11H1Q8NG94 326 aa1.72□□□□□ -2.13
PFDN4-202ENST00000441080 RNASEH2CQ8TDP1 164 aaKnown RBP1.72□□□□□ -2.13
PFDN4-202ENST00000441080 C16orf78Q8WTQ4 265 aa1.72□□□□□ -2.13
PFDN4-202ENST00000441080 TAMM41Q96BW9 452 aa1.72□□□□□ -2.13
PFDN4-202ENST00000441080 UPK3BQ9BT76 320 aa1.72□□□□□ -2.13
PFDN4-202ENST00000441080 LINC00527Q9UJ94 153 aa1.72□□□□□ -2.13
PFDN4-202ENST00000441080 OTOFQ9HC10 1997 aa1.72□□□□□ -2.13
PFDN4-202ENST00000441080 SLIT2O94813 1529 aa1.71□□□□□ -2.14
PFDN4-202ENST00000441080 MAP3K19Q56UN5 1328 aa1.71□□□□□ -2.14
PFDN4-202ENST00000441080 K7ERQ8 282 aa1.71□□□□□ -2.14
PFDN4-202ENST00000441080 M0QYV0 167 aa1.71□□□□□ -2.14
PFDN4-202ENST00000441080 LIN7AO14910 233 aaPredicted RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms