RNA–Protein interactions for RNA: ENST00000440186.5

PTPN12-207, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 1 (best)

Gene PTPN12, Length 159 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-207ENST00000440186 PRUNE2Q8WUY3 3088 aa1.39□□□□□ -2.19
PTPN12-207ENST00000440186 CACNA1HO95180 2353 aa1.39□□□□□ -2.19
PTPN12-207ENST00000440186 MYH1P12882 1939 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 SCN10AQ9Y5Y9 1956 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 PLXNA1Q9UIW2 1896 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 IGKV1OR2-108A0A075B7D4 117 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 PGPA6NDG6 321 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 ERICH4A6NGS2 130 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 RNASEK-C17orf49H0YIS7 233 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 SGCEO43556 437 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 MYO1DO94832 1006 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 FADS2O95864 444 aaKnown RBP1.38□□□□□ -2.19
PTPN12-207ENST00000440186 SOD3P08294 240 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 TSPOP30536 169 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 RPA3P35244 121 aaPredicted RBP1.38□□□□□ -2.19
PTPN12-207ENST00000440186 TTPAP49638 278 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 OR2B6P58173 313 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 FLI1Q01543 452 aaPredicted RBP1.38□□□□□ -2.19
PTPN12-207ENST00000440186 BAXQ07812 192 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 TPBGQ13641 420 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 ZNF235Q14590 738 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 TRIP13Q15645 432 aaPredicted RBP1.38□□□□□ -2.19
PTPN12-207ENST00000440186 ZBTB6Q15916 424 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 TMEM241Q24JQ0 296 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 BSXQ3C1V8 233 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 CEACAM21Q3KPI0 293 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 LDLRAD2Q5SZI1 272 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 ZFAND6Q6FIF0 208 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 ZNF773Q6PK81 442 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 AHSA2Q719I0 299 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 TMEM144Q7Z5S9 345 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 OR6K3Q8NGY3 331 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 OR8S1Q8NH09 359 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 YIPF5Q969M3 257 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 YPEL4Q96NS1 127 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 SERPINB11Q96P15 392 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 PITX2Q99697 317 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 MFSD1Q9H3U5 465 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 CHMP4BQ9H444 224 aaKnown RBP1.38□□□□□ -2.19
PTPN12-207ENST00000440186 TRIM45Q9H8W5 580 aaPredicted RBP1.38□□□□□ -2.19
PTPN12-207ENST00000440186 TREM1Q9NP99 234 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 INIPQ9NRY2 104 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 SNX24Q9Y343 169 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 CDH23Q9H251 3354 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 COL4A6Q14031 1691 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 MUC6Q6W4X9 2439 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 TRANK1O15050 2925 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 SPTBN5Q9NRC6 3674 aaKnown RBP1.38□□□□□ -2.19
PTPN12-207ENST00000440186 ZBED9Q6R2W3 1325 aa1.38□□□□□ -2.19
PTPN12-207ENST00000440186 PRRC2BQ5JSZ5 2229 aaKnown RBP1.38□□□□□ -2.19
PTPN12-207ENST00000440186 PLIN4Q96Q06 1357 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 MYH8P13535 1937 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 IGHV3-43A0A0B4J1X8 118 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 CD300LBA8K4G0 201 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 M0QX08 132 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 M0QXV9 152 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 UBDO15205 165 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 RGS5O15539 181 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 NEMFO60524 1076 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 PDCD6O75340 191 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 PTHLHP12272 177 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 PRTN3P24158 256 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 CNTFRP26992 372 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 MAGEA6P43360 314 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 AQP5P55064 265 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 OR10A3P58181 314 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 FMODQ06828 376 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 XRCC4Q13426 336 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 ENDOGQ14249 297 aaKnown RBP1.37□□□□□ -2.19
PTPN12-207ENST00000440186 USF2Q15853 346 aaPredicted RBP1.37□□□□□ -2.19
PTPN12-207ENST00000440186 LRRC26Q2I0M4 334 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 TMEM215Q68D42 235 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 ERICH5Q6P6B1 374 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 FAM183BPQ6ZVS7 135 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 MRPL52Q86TS9 123 aaKnown RBP1.37□□□□□ -2.19
PTPN12-207ENST00000440186 MARCH3Q86UD3 253 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 LRRC6Q86X45 466 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 AMN1Q8IY45 258 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 LINC00304Q8N9R0 145 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 OR2M3Q8NG83 312 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 OR4C13Q8NGP0 309 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 OLFM3Q96PB7 478 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 LINC01587Q99440 93 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 SUCNR1Q9BXA5 334 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 PLA2G12AQ9BZM1 189 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 SLC25A31Q9H0C2 315 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 OR52A5Q9H2C5 316 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 METTL8Q9H825 291 aaKnown RBP1.37□□□□□ -2.19
PTPN12-207ENST00000440186 ZNF492Q9P255 531 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 CHD7Q9P2D1 2997 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 NAV1Q8NEY1 1877 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 MYO5AQ9Y4I1 1855 aaKnown RBP1.37□□□□□ -2.19
PTPN12-207ENST00000440186 SDK2Q58EX2 2172 aa1.37□□□□□ -2.19
PTPN12-207ENST00000440186 PTPRZ1P23471 2315 aaPredicted RBP1.37□□□□□ -2.19
PTPN12-207ENST00000440186 RIF1Q5UIP0 2472 aaKnown RBP1.37□□□□□ -2.19
PTPN12-207ENST00000440186 MYH7P12883 1935 aa1.36□□□□□ -2.19
PTPN12-207ENST00000440186 FAM186AA6NE01 2351 aa1.36□□□□□ -2.19
PTPN12-207ENST00000440186 COL11A1P12107 1806 aaPredicted RBP1.36□□□□□ -2.19
PTPN12-207ENST00000440186 TET1Q8NFU7 2136 aa1.36□□□□□ -2.19
PTPN12-207ENST00000440186 CHD9Q3L8U1 2897 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms