RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 PTGES3LE9PB15 166 aa16.01■□□□□ 0.15
NCKIPSD-206ENST00000439518 TXNL1O43396 289 aa16.01■□□□□ 0.15
NCKIPSD-206ENST00000439518 MOSP00540 346 aa16.01■□□□□ 0.15
NCKIPSD-206ENST00000439518 GABPB1Q06547 395 aaPredicted RBP16.01■□□□□ 0.15
NCKIPSD-206ENST00000439518 C1orf100Q5SVJ3 147 aa16.01■□□□□ 0.15
NCKIPSD-206ENST00000439518 OR2W3Q7Z3T1 314 aa16.01■□□□□ 0.15
NCKIPSD-206ENST00000439518 ZNF554Q86TJ5 538 aa16.01■□□□□ 0.15
NCKIPSD-206ENST00000439518 LRRTM1Q86UE6 522 aa16.01■□□□□ 0.15
NCKIPSD-206ENST00000439518 FOXRED2Q8IWF2 684 aa16.01■□□□□ 0.15
NCKIPSD-206ENST00000439518 STPG2Q8N412 459 aa16.01■□□□□ 0.15
NCKIPSD-206ENST00000439518 PRR18Q8N4B5 295 aa16.01■□□□□ 0.15
NCKIPSD-206ENST00000439518 OR10V1Q8NGI7 309 aa16.01■□□□□ 0.15
NCKIPSD-206ENST00000439518 PHYHIPQ92561 330 aa16.01■□□□□ 0.15
NCKIPSD-206ENST00000439518 CST11Q9H112 138 aa16.01■□□□□ 0.15
NCKIPSD-206ENST00000439518 DCLRE1BQ9H816 532 aa16.01■□□□□ 0.15
NCKIPSD-206ENST00000439518 DUS4LO95620 317 aaKnown RBP16■□□□□ 0.15
NCKIPSD-206ENST00000439518 UBBP0CG47 229 aa16■□□□□ 0.15
NCKIPSD-206ENST00000439518 CD37P11049 281 aa16■□□□□ 0.15
NCKIPSD-206ENST00000439518 GPR12P47775 334 aa16■□□□□ 0.15
NCKIPSD-206ENST00000439518 SLC35B1P78383 322 aa16■□□□□ 0.15
NCKIPSD-206ENST00000439518 SPHARQ15513 63 aa16■□□□□ 0.15
NCKIPSD-206ENST00000439518 COMMD1Q8N668 190 aa16■□□□□ 0.15
NCKIPSD-206ENST00000439518 OR8H1Q8NGG4 311 aa16■□□□□ 0.15
NCKIPSD-206ENST00000439518 TMED9Q9BVK6 235 aa16■□□□□ 0.15
NCKIPSD-206ENST00000439518 ZFP57Q9NU63 452 aa16■□□□□ 0.15
NCKIPSD-206ENST00000439518 NKX1-2Q9UD57 310 aaPredicted RBP16■□□□□ 0.15
NCKIPSD-206ENST00000439518 AP4M1O00189 453 aa15.99■□□□□ 0.15
NCKIPSD-206ENST00000439518 LANCL1O43813 399 aa15.99■□□□□ 0.15
NCKIPSD-206ENST00000439518 MPIG6BO95866 241 aa15.99■□□□□ 0.15
NCKIPSD-206ENST00000439518 VSIG8P0DPA2 414 aa15.99■□□□□ 0.15
NCKIPSD-206ENST00000439518 CHATP28329 748 aa15.99■□□□□ 0.15
NCKIPSD-206ENST00000439518 SLC6A1P30531 599 aa15.99■□□□□ 0.15
NCKIPSD-206ENST00000439518 THBS3P49746 956 aa15.99■□□□□ 0.15
NCKIPSD-206ENST00000439518 MORN2Q502X0 79 aa15.99■□□□□ 0.15
NCKIPSD-206ENST00000439518 C5orf24Q7Z6I8 188 aa15.99■□□□□ 0.15
NCKIPSD-206ENST00000439518 MRPL41Q8IXM3 137 aaKnown RBP15.99■□□□□ 0.15
NCKIPSD-206ENST00000439518 MRPL30Q8TCC3 161 aaKnown RBP15.99■□□□□ 0.15
NCKIPSD-206ENST00000439518 S1PR3Q99500 378 aa15.99■□□□□ 0.15
NCKIPSD-206ENST00000439518 OR2S2Q9NQN1 319 aa15.99■□□□□ 0.15
NCKIPSD-206ENST00000439518 KCNIP1Q9NZI2 227 aa15.99■□□□□ 0.15
NCKIPSD-206ENST00000439518 HTD2P86397 168 aa15.98■□□□□ 0.15
NCKIPSD-206ENST00000439518 IRF3Q14653 427 aa15.98■□□□□ 0.15
NCKIPSD-206ENST00000439518 GNMTQ14749 295 aa15.98■□□□□ 0.15
NCKIPSD-206ENST00000439518 GLT8D1Q68CQ7 371 aa15.98■□□□□ 0.15
NCKIPSD-206ENST00000439518 OR10K2Q6IF99 312 aa15.98■□□□□ 0.15
NCKIPSD-206ENST00000439518 C18orf65Q6ZTR6 163 aa15.98■□□□□ 0.15
NCKIPSD-206ENST00000439518 FAM71E2Q8N5Q1 922 aa15.98■□□□□ 0.15
NCKIPSD-206ENST00000439518 OR51D1Q8NGF3 324 aa15.98■□□□□ 0.15
NCKIPSD-206ENST00000439518 RBMXL1Q96E39 390 aaKnown RBP15.98■□□□□ 0.15
NCKIPSD-206ENST00000439518 SULT4A1Q9BR01 284 aa15.98■□□□□ 0.15
NCKIPSD-206ENST00000439518 JPT1Q9UK76 154 aa15.98■□□□□ 0.15
NCKIPSD-206ENST00000439518 SRMP19623 302 aa15.97■□□□□ 0.15
NCKIPSD-206ENST00000439518 RPS27AP62979 156 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-206ENST00000439518 QRFPP83859 136 aa15.97■□□□□ 0.15
NCKIPSD-206ENST00000439518 NKAPLQ5M9Q1 402 aa15.97■□□□□ 0.15
NCKIPSD-206ENST00000439518 C8orf86Q6ZUL3 223 aa15.97■□□□□ 0.15
NCKIPSD-206ENST00000439518 CEACAM19Q7Z692 300 aa15.97■□□□□ 0.15
NCKIPSD-206ENST00000439518 OR52L2PQ8NGH6 319 aa15.97■□□□□ 0.15
NCKIPSD-206ENST00000439518 NRG4Q8WWG1 115 aa15.97■□□□□ 0.15
NCKIPSD-206ENST00000439518 NEDD4LQ96PU5 975 aa15.97■□□□□ 0.15
NCKIPSD-206ENST00000439518 SCN3BQ9NY72 215 aa15.97■□□□□ 0.15
NCKIPSD-206ENST00000439518 SLC22A1O15245 554 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 UCHL1P09936 223 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 HTR2CP28335 458 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 PPP1CCP36873 323 aaKnown RBP15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 F2RL1P55085 397 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 KRTAP10-11P60412 298 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 UNC119Q13432 240 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 LSAMPQ13449 338 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 MED22Q15528 200 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 HSD17B12Q53GQ0 312 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 RBM48Q5RL73 367 aaKnown RBP15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 LY6G6FQ5SQ64 297 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 TEX38Q6PEX7 206 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 ODF3L1Q8IXM7 274 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 KCNG3Q8TAE7 436 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 P2RX4Q99571 388 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 RASL11BQ9BPW5 248 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 FAAP24Q9BTP7 215 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 TM2D1Q9BX74 207 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 TMEM59Q9BXS4 323 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 DUSP21Q9H596 190 aa15.96■□□□□ 0.15
NCKIPSD-206ENST00000439518 NUDT19A8MXV4 375 aa15.95■□□□□ 0.14
NCKIPSD-206ENST00000439518 K7EIL1 84 aa15.95■□□□□ 0.14
NCKIPSD-206ENST00000439518 YPEL1O60688 119 aa15.95■□□□□ 0.14
NCKIPSD-206ENST00000439518 MYCNOSP40205 109 aa15.95■□□□□ 0.14
NCKIPSD-206ENST00000439518 AQP4P55087 323 aa15.95■□□□□ 0.14
NCKIPSD-206ENST00000439518 EGFEM1PQ0D2K5 195 aa15.95■□□□□ 0.14
NCKIPSD-206ENST00000439518 PNLIPRP3Q17RR3 467 aa15.95■□□□□ 0.14
NCKIPSD-206ENST00000439518 C6orf201Q7Z4U5 140 aa15.95■□□□□ 0.14
NCKIPSD-206ENST00000439518 ZNF695Q8IW36 515 aa15.95■□□□□ 0.14
NCKIPSD-206ENST00000439518 RNF152Q8N8N0 203 aa15.95■□□□□ 0.14
NCKIPSD-206ENST00000439518 KLHL30-AS1Q8NEE0 82 aa15.95■□□□□ 0.14
NCKIPSD-206ENST00000439518 YPEL2Q96QA6 119 aa15.95■□□□□ 0.14
NCKIPSD-206ENST00000439518 HSPB9Q9BQS6 159 aa15.95■□□□□ 0.14
NCKIPSD-206ENST00000439518 ABHD14AQ9BUJ0 271 aa15.95■□□□□ 0.14
NCKIPSD-206ENST00000439518 GON7Q9BXV9 100 aa15.95■□□□□ 0.14
NCKIPSD-206ENST00000439518 LRRC42Q9Y546 428 aa15.95■□□□□ 0.14
NCKIPSD-206ENST00000439518 TMEM14DPA8MWL7 114 aa15.94■□□□□ 0.14
NCKIPSD-206ENST00000439518 NAPSAO96009 420 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms