RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 CELA3AP09093 270 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 RAB2AP61019 212 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 KHDC3LQ587J8 217 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 ZNF429Q86V71 674 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 OR10G4Q8NGN3 311 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 ZNF488Q96MN9 340 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 RAB40CQ96S21 281 aa13.94□□□□□ -0.18
CLCNKA-203ENST00000439316 URB1O60287 2271 aaKnown RBP13.93□□□□□ -0.18
CLCNKA-203ENST00000439316 LOC102723971A0A1B0GUV8 181 aa13.93□□□□□ -0.18
CLCNKA-203ENST00000439316 ZNF727A8MUV8 499 aa13.93□□□□□ -0.18
CLCNKA-203ENST00000439316 NPIPB11E5RHQ5 1161 aa13.93□□□□□ -0.18
CLCNKA-203ENST00000439316 NEURL1O76050 574 aa13.93□□□□□ -0.18
CLCNKA-203ENST00000439316 ARR3P36575 388 aa13.93□□□□□ -0.18
CLCNKA-203ENST00000439316 RPL23AP62750 156 aaKnown RBP13.93□□□□□ -0.18
CLCNKA-203ENST00000439316 DLK1P80370 383 aa13.93□□□□□ -0.18
CLCNKA-203ENST00000439316 LINC00696Q6ZRV3 163 aa13.93□□□□□ -0.18
CLCNKA-203ENST00000439316 OR10J5Q8NHC4 309 aa13.93□□□□□ -0.18
CLCNKA-203ENST00000439316 TVP23CQ96ET8 276 aa13.93□□□□□ -0.18
CLCNKA-203ENST00000439316 OR51M1Q9H341 326 aa13.93□□□□□ -0.18
CLCNKA-203ENST00000439316 PRRC2CQ9Y520 2896 aaKnown RBP13.93□□□□□ -0.18
CLCNKA-203ENST00000439316 FREM1Q5H8C1 2179 aa13.93□□□□□ -0.18
CLCNKA-203ENST00000439316 ARGFXA6NJG6 315 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 OR5B21A6NL26 309 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 DEGS1O15121 323 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 NKX2-8O15522 239 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 SYNGR4O95473 234 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 FBP1P09467 338 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 PSG2P11465 335 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 RPS10P46783 165 aaKnown RBP13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 SLC35E3Q7Z769 313 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 ZNF573Q86YE8 665 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 RDH5Q92781 318 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 TMPRSS5Q9H3S3 457 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 SIRT7Q9NRC8 400 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 B4GALT7Q9UBV7 327 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 MMP24Q9Y5R2 645 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 MPC1Q9Y5U8 109 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 CEP295Q9C0D2 2601 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 CXorf65A6NEN9 183 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 ANKRD30BLA7E2S9 258 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 IFNA5P01569 189 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 SERPINE2P07093 398 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 CEBPGP53567 150 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 TMEM267Q0VDI3 215 aaPredicted RBP13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 KIAA0141Q14154 515 aaPredicted RBP13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 ELOBQ15370 118 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 FAM58AQ8N1B3 248 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 OR51H1Q8NH63 302 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 Q8WTZ3 238 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 APH1AQ96BI3 265 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 NIPSNAP3BQ9BS92 247 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 PKIBQ9C010 78 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 PLA2G3Q9NZ20 509 aa13.92□□□□□ -0.18
CLCNKA-203ENST00000439316 FRYQ5TBA9 3013 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 LRP5LA4QPB2 252 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 H3BP45 60 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 HS3ST1O14792 307 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 LILRA1O75019 489 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 CNOT4O95628 575 aaKnown RBP13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 WT1P19544 449 aaPredicted RBP13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 GNG3P63215 75 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 THNSL2Q86YJ6 484 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 OR10V1Q8NGI7 309 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 LSM10Q969L4 123 aaKnown RBP13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 ABI3Q9P2A4 366 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 ERRFI1Q9UJM3 462 aaPredicted RBP13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 IGKV1-39P01597 117 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 IGKV1D-39P04432 117 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 CXCL1P09341 107 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 HOXA5P20719 270 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 WNT5AP41221 380 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 RTP5Q14D33 572 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 NCMAPQ5T1S8 102 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 Q6ZRM9 215 aa13.91□□□□□ -0.18
CLCNKA-203ENST00000439316 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.9□□□□□ -0.18
CLCNKA-203ENST00000439316 IGLV2-14P01704 120 aa13.9□□□□□ -0.18
CLCNKA-203ENST00000439316 S100PP25815 95 aa13.9□□□□□ -0.18
CLCNKA-203ENST00000439316 GLIPR1P48060 266 aa13.9□□□□□ -0.18
CLCNKA-203ENST00000439316 PLP2Q04941 152 aa13.9□□□□□ -0.18
CLCNKA-203ENST00000439316 OR1C1Q15619 314 aa13.9□□□□□ -0.18
CLCNKA-203ENST00000439316 ZNF343Q6P1L6 599 aa13.9□□□□□ -0.18
CLCNKA-203ENST00000439316 C17orf78Q8N4C9 275 aa13.9□□□□□ -0.18
CLCNKA-203ENST00000439316 HES7Q9BYE0 225 aa13.9□□□□□ -0.18
CLCNKA-203ENST00000439316 OR51I2Q9H344 312 aa13.9□□□□□ -0.18
CLCNKA-203ENST00000439316 OR1A1Q9P1Q5 309 aa13.9□□□□□ -0.18
CLCNKA-203ENST00000439316 CACNG5Q9UF02 275 aa13.9□□□□□ -0.18
CLCNKA-203ENST00000439316 MIOXQ9UGB7 285 aa13.9□□□□□ -0.18
CLCNKA-203ENST00000439316 SPTBN4Q9H254 2564 aa13.9□□□□□ -0.19
CLCNKA-203ENST00000439316 FAM166BA8MTA8 275 aa13.89□□□□□ -0.19
CLCNKA-203ENST00000439316 MAGEA5P43359 124 aa13.89□□□□□ -0.19
CLCNKA-203ENST00000439316 ERVFRD-1P60508 538 aa13.89□□□□□ -0.19
CLCNKA-203ENST00000439316 IZUMO4Q1ZYL8 232 aa13.89□□□□□ -0.19
CLCNKA-203ENST00000439316 SLC25A24Q6NUK1 477 aa13.89□□□□□ -0.19
CLCNKA-203ENST00000439316 Q6P435 159 aa13.89□□□□□ -0.19
CLCNKA-203ENST00000439316 MOB1BQ7L9L4 216 aa13.89□□□□□ -0.19
CLCNKA-203ENST00000439316 P4HA3Q7Z4N8 544 aa13.89□□□□□ -0.19
CLCNKA-203ENST00000439316 TTTY12Q9BZ98 90 aa13.89□□□□□ -0.19
CLCNKA-203ENST00000439316 J3QT63 122 aa13.89□□□□□ -0.19
CLCNKA-203ENST00000439316 SYNGR2O43760 224 aa13.89□□□□□ -0.19
CLCNKA-203ENST00000439316 GFRA3O60609 400 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms