RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 LPAL2Q16609 132 aa13.06□□□□□ -0.32
APP-208ENST00000439274 SPNS3Q6ZMD2 512 aa13.06□□□□□ -0.32
APP-208ENST00000439274 NUFIP2Q7Z417 695 aaKnown RBP13.06□□□□□ -0.32
APP-208ENST00000439274 APH1AQ96BI3 265 aa13.06□□□□□ -0.32
APP-208ENST00000439274 TOLLIPQ9H0E2 274 aa13.06□□□□□ -0.32
APP-208ENST00000439274 ANKRD30BLA7E2S9 258 aa13.05□□□□□ -0.32
APP-208ENST00000439274 SYNGR4O95473 234 aa13.05□□□□□ -0.32
APP-208ENST00000439274 CNOT4O95628 575 aaKnown RBP13.05□□□□□ -0.32
APP-208ENST00000439274 IGHV2-70P01814 119 aa13.05□□□□□ -0.32
APP-208ENST00000439274 HBE1P02100 147 aa13.05□□□□□ -0.32
APP-208ENST00000439274 S100PP25815 95 aa13.05□□□□□ -0.32
APP-208ENST00000439274 S100GP29377 79 aa13.05□□□□□ -0.32
APP-208ENST00000439274 RAB2AP61019 212 aa13.05□□□□□ -0.32
APP-208ENST00000439274 KHDC3LQ587J8 217 aa13.05□□□□□ -0.32
APP-208ENST00000439274 CDPF1Q6NVV7 123 aa13.05□□□□□ -0.32
APP-208ENST00000439274 HAPLN4Q86UW8 402 aa13.05□□□□□ -0.32
APP-208ENST00000439274 ZNF610Q8N9Z0 462 aa13.05□□□□□ -0.32
APP-208ENST00000439274 OR10V1Q8NGI7 309 aa13.05□□□□□ -0.32
APP-208ENST00000439274 OR1K1Q8NGR3 316 aa13.05□□□□□ -0.32
APP-208ENST00000439274 RIMS4Q9H426 269 aaPredicted RBP13.05□□□□□ -0.32
APP-208ENST00000439274 B4E171 279 aa13.05□□□□□ -0.32
APP-208ENST00000439274 CER1O95813 267 aa13.05□□□□□ -0.32
APP-208ENST00000439274 IGKV1-5P01602 117 aa13.05□□□□□ -0.32
APP-208ENST00000439274 COX5BP10606 129 aa13.05□□□□□ -0.32
APP-208ENST00000439274 TSPAN7P41732 249 aa13.05□□□□□ -0.32
APP-208ENST00000439274 GLIPR1P48060 266 aa13.05□□□□□ -0.32
APP-208ENST00000439274 FAM90A2PQ658T7 463 aa13.05□□□□□ -0.32
APP-208ENST00000439274 TCEAL6Q6IPX3 200 aa13.05□□□□□ -0.32
APP-208ENST00000439274 FAM173AQ9BQD7 235 aa13.05□□□□□ -0.32
APP-208ENST00000439274 C12orf49Q9H741 205 aa13.05□□□□□ -0.32
APP-208ENST00000439274 PRSS50Q9UI38 385 aa13.05□□□□□ -0.32
APP-208ENST00000439274 MED12LQ86YW9 2145 aa13.05□□□□□ -0.32
APP-208ENST00000439274 SIRPB1O00241 398 aa13.04□□□□□ -0.32
APP-208ENST00000439274 DEGS1O15121 323 aa13.04□□□□□ -0.32
APP-208ENST00000439274 TRGC2P03986 189 aa13.04□□□□□ -0.32
APP-208ENST00000439274 CD200P41217 278 aa13.04□□□□□ -0.32
APP-208ENST00000439274 HNF4GQ14541 408 aa13.04□□□□□ -0.32
APP-208ENST00000439274 TESK1Q15569 626 aa13.04□□□□□ -0.32
APP-208ENST00000439274 ZNF787Q6DD87 383 aa13.04□□□□□ -0.32
APP-208ENST00000439274 ZNF880Q6PDB4 577 aa13.04□□□□□ -0.32
APP-208ENST00000439274 SLC35E3Q7Z769 313 aa13.04□□□□□ -0.32
APP-208ENST00000439274 RAB40CQ96S21 281 aa13.04□□□□□ -0.32
APP-208ENST00000439274 PLK3Q9H4B4 646 aa13.04□□□□□ -0.32
APP-208ENST00000439274 PSENENQ9NZ42 101 aa13.04□□□□□ -0.32
APP-208ENST00000439274 KCNS2Q9ULS6 477 aa13.04□□□□□ -0.32
APP-208ENST00000439274 TRBV6-6A0A0A6YYG2 114 aa13.04□□□□□ -0.32
APP-208ENST00000439274 SYNGR2O43760 224 aa13.04□□□□□ -0.32
APP-208ENST00000439274 HIST1H2BKO60814 126 aa13.04□□□□□ -0.32
APP-208ENST00000439274 HIST1H2BJP06899 126 aa13.04□□□□□ -0.32
APP-208ENST00000439274 HIST1H2BOP23527 126 aa13.04□□□□□ -0.32
APP-208ENST00000439274 HIST1H2BBP33778 126 aa13.04□□□□□ -0.32
APP-208ENST00000439274 CDX1P47902 265 aaPredicted RBP13.04□□□□□ -0.32
APP-208ENST00000439274 HIST1H2BDP58876 126 aa13.04□□□□□ -0.32
APP-208ENST00000439274 HIST1H2BCP62807 126 aa13.04□□□□□ -0.32
APP-208ENST00000439274 GNG3P63215 75 aa13.04□□□□□ -0.32
APP-208ENST00000439274 PLP2Q04941 152 aa13.04□□□□□ -0.32
APP-208ENST00000439274 HIST2H2BEQ16778 126 aa13.04□□□□□ -0.32
APP-208ENST00000439274 PDZD11Q5EBL8 140 aa13.04□□□□□ -0.32
APP-208ENST00000439274 PYY3Q5JQD4 70 aa13.04□□□□□ -0.32
APP-208ENST00000439274 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.04□□□□□ -0.32
APP-208ENST00000439274 GFI1BQ5VTD9 330 aa13.04□□□□□ -0.32
APP-208ENST00000439274 DPPA3Q6W0C5 159 aa13.04□□□□□ -0.32
APP-208ENST00000439274 LINC00696Q6ZRV3 163 aa13.04□□□□□ -0.32
APP-208ENST00000439274 ZNF573Q86YE8 665 aa13.04□□□□□ -0.32
APP-208ENST00000439274 SCGB1C1Q8TD33 95 aa13.04□□□□□ -0.32
APP-208ENST00000439274 HIST1H2BHQ93079 126 aa13.04□□□□□ -0.32
APP-208ENST00000439274 HIST1H2BNQ99877 126 aa13.04□□□□□ -0.32
APP-208ENST00000439274 HIST1H2BMQ99879 126 aa13.04□□□□□ -0.32
APP-208ENST00000439274 CABLES2Q9BTV7 478 aa13.04□□□□□ -0.32
APP-208ENST00000439274 TTTY12Q9BZ98 90 aa13.04□□□□□ -0.32
APP-208ENST00000439274 ZDBF2Q9HCK1 2354 aa13.03□□□□□ -0.32
APP-208ENST00000439274 A0A1W2PR80 420 aa13.03□□□□□ -0.32
APP-208ENST00000439274 ZNF525Q8N782 197 aa13.03□□□□□ -0.32
APP-208ENST00000439274 GTF3AQ92664 365 aaKnown RBP13.03□□□□□ -0.32
APP-208ENST00000439274 RBM7Q9Y580 266 aaKnown RBP13.03□□□□□ -0.32
APP-208ENST00000439274 DIDO1Q9BTC0 2240 aaKnown RBP13.03□□□□□ -0.32
APP-208ENST00000439274 CHD3Q12873 2000 aaKnown RBP13.03□□□□□ -0.32
APP-208ENST00000439274 URB1O60287 2271 aaKnown RBP13.03□□□□□ -0.32
APP-208ENST00000439274 BCL2P10415 239 aa13.03□□□□□ -0.32
APP-208ENST00000439274 ARR3P36575 388 aa13.03□□□□□ -0.32
APP-208ENST00000439274 TLE1Q04724 770 aa13.03□□□□□ -0.32
APP-208ENST00000439274 Q6P435 159 aa13.03□□□□□ -0.32
APP-208ENST00000439274 OR51I2Q9H344 312 aa13.03□□□□□ -0.32
APP-208ENST00000439274 TRAV1-1A0A0B4J248 108 aa13.02□□□□□ -0.32
APP-208ENST00000439274 WDR1O75083 606 aa13.02□□□□□ -0.32
APP-208ENST00000439274 MT-CO3P00414 261 aa13.02□□□□□ -0.32
APP-208ENST00000439274 APLNRP35414 380 aa13.02□□□□□ -0.32
APP-208ENST00000439274 ELLP55199 621 aaPredicted RBP13.02□□□□□ -0.32
APP-208ENST00000439274 OR1C1Q15619 314 aa13.02□□□□□ -0.32
APP-208ENST00000439274 ZNF585BQ52M93 769 aa13.02□□□□□ -0.32
APP-208ENST00000439274 ABHD17BQ5VST6 288 aa13.02□□□□□ -0.32
APP-208ENST00000439274 LINC00596Q86U02 117 aa13.02□□□□□ -0.32
APP-208ENST00000439274 TMEM251Q8N6I4 163 aa13.02□□□□□ -0.32
APP-208ENST00000439274 HIPK2Q9H2X6 1198 aa13.02□□□□□ -0.32
APP-208ENST00000439274 SIRT7Q9NRC8 400 aa13.02□□□□□ -0.32
APP-208ENST00000439274 B4GALT7Q9UBV7 327 aa13.02□□□□□ -0.32
APP-208ENST00000439274 SPANXN5Q5MJ07 72 aa13.02□□□□□ -0.33
APP-208ENST00000439274 WDR86Q86TI4 376 aa13.02□□□□□ -0.33
APP-208ENST00000439274 RCC1LQ96I51 464 aaKnown RBP13.02□□□□□ -0.33
APP-208ENST00000439274 SSX3Q99909 188 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms