RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 WSB1Q9Y6I7 421 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 PPP5D1E7EU14 171 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 HBZP02008 142 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 FAM87AP0C7U9 286 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 HOXB1P14653 301 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-205ENST00000439160 CXCL2P19875 107 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 GAS1P54826 345 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 TMEM50BP56557 158 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 BPIFB3P59826 476 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 BVESQ8NE79 360 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 DTD1Q8TEA8 209 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 Q9N2K0 584 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 USF3Q68DE3 2245 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 A0A1B0GTI1 187 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 MAP1LC3B2A6NCE7 125 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 MGST3O14880 152 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 FGF8P55075 233 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-205ENST00000439160 TMEM45BQ96B21 275 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 ADTRPQ96IZ2 230 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 SCNM1Q9BWG6 230 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 MAP1LC3BQ9GZQ8 125 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 RCC2Q9P258 522 aaKnown RBP10.57□□□□□ -0.72
TCOF1-205ENST00000439160 CLN8Q9UBY8 286 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 CLPSP04118 112 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 CLEC3BP05452 202 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 P2RY1P47900 373 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 ERVS71-1P61550 626 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 IL24Q13007 206 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 NSUN5P2Q63ZY6 315 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 MMP26Q9NRE1 261 aa10.57□□□□□ -0.72
TCOF1-205ENST00000439160 SLC25A10Q9UBX3 287 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-205ENST00000439160 IGLV3-32A0A0A0MS00 114 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 K7EQM0 130 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 FAM27E3Q08E93 113 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 OR1A1Q9P1Q5 309 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 MPDZO75970 2070 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 LOC390937A0A1W2PQ73 354 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 RBP4P02753 201 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 OR4A8P0C604 315 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 MPV17P39210 176 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 LHX2P50458 406 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 BATFQ16520 125 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 TGIF2LYQ8IUE0 185 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 TGIF2LXQ8IUE1 241 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 CBLN2Q8IUK8 224 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 MOB3AQ96BX8 217 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 CABLES2Q9BTV7 478 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 ZNF835Q9Y2P0 537 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 hCG_38984A0A1B0GV85 526 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 NAT2P11245 290 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 CLDN18P56856 261 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 EWSR1Q01844 656 aaKnown RBP eCLIP10.56□□□□□ -0.72
TCOF1-205ENST00000439160 HABP2Q14520 560 aaPredicted RBP10.56□□□□□ -0.72
TCOF1-205ENST00000439160 CALHM1Q8IU99 346 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 OR1L1Q8NH94 360 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 HSF4Q9ULV5 492 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 HEATR1Q9H583 2144 aaKnown RBP10.56□□□□□ -0.72
TCOF1-205ENST00000439160 MFNGO00587 321 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 P2RY4P51582 365 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 NCR3LG1Q68D85 454 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 C1orf174Q8IYL3 243 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 OR8B3Q8NGG8 313 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 OR8B2Q96RD0 313 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 HSD17B10Q99714 261 aaKnown RBP10.56□□□□□ -0.72
TCOF1-205ENST00000439160 PKIBQ9C010 78 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 LPAR2Q9HBW0 351 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 TNFSF18Q9UNG2 199 aa10.56□□□□□ -0.72
TCOF1-205ENST00000439160 RAB19A4D1S5 217 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 LRRC3CA6NJW4 275 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 J3QRE1 110 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 TOX4O94842 621 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 NQO2P16083 231 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 H2BFSP57053 126 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 KCNMB1Q16558 191 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 PLAC9Q5JTB6 97 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 PRR27Q6MZM9 219 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 C5orf66Q9H5L9 145 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 CISD1Q9NZ45 108 aaKnown RBP10.55□□□□□ -0.72
TCOF1-205ENST00000439160 KIR2DS2P43631 304 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 TNXAQ16473 311 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 HSD17B13Q7Z5P4 300 aaPredicted RBP10.55□□□□□ -0.72
TCOF1-205ENST00000439160 HARBI1Q96MB7 349 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 OR5AC2Q9NZP5 309 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 DOK5Q9P104 306 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 TSTD3H0UI37 97 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 PPP1R2P9O14990 202 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 NHLH2Q02577 135 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 ZNF319Q9P2F9 582 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 FANCMQ8IYD8 2048 aa10.55□□□□□ -0.72
TCOF1-205ENST00000439160 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.55□□□□□ -0.729e-7■■■■□ 22.6
TCOF1-205ENST00000439160 A0A1W2PPQ1 181 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 NMBP08949 121 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 CECR9P0C854 216 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 APELAP0DMC3 54 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 SNRPEP62304 92 aaKnown RBP10.54□□□□□ -0.72
TCOF1-205ENST00000439160 ANKRD55Q3KP44 614 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 OVCH2Q7RTZ1 564 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 HEATR5AQ86XA9 2040 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 BAGE3Q86Y29 109 aa10.54□□□□□ -0.72
TCOF1-205ENST00000439160 BAGE2Q86Y30 109 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms