RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 LIN7AO14910 233 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 PFDN6O15212 129 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 GYG2O15488 501 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 FKBP6O75344 327 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 HSBP1O75506 76 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 FCN3O75636 299 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 RBBP9O75884 186 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 GLSO94925 669 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 CCNB2O95067 398 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 SCELO95171 688 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 C1orf105O95561 183 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 ATP6V1G2O95670 118 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 TSPAN13O95857 204 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 CD160O95971 181 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 CA1P00915 261 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 IGF2P01344 180 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 RPN2P04844 631 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 HLA-DQB2P05538 268 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 KRT16P08779 473 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 OCMP0CE72 109 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 SLC35E2BP0CK96 405 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 PMCHP20382 165 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 OGNP20774 298 aaKnown RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 RPS3P23396 243 aaKnown RBP eCLIP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 IL12AP29459 219 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 CX3CR1P49238 355 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 RPL14P50914 215 aaKnown RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 DAP3P51398 398 aaKnown RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 TAS2R39P59534 338 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 KRTAP12-4P60329 112 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 ATP6V0D1P61421 351 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 B2MP61769 119 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 AP1S1P61966 158 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 RPS24P62847 133 aaKnown RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 MT1HP80294 61 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 GNA12Q03113 381 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 SELENBP1Q13228 472 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 PMS2P3Q13401 168 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 MED21Q13503 144 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 TAF1AQ15573 450 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 SNCBQ16143 134 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 TRMT5Q32P41 509 aaKnown RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 TIGITQ495A1 244 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 DNAL1Q4LDG9 190 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 C5orf47Q569G3 176 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 PIGGQ5H8A4 983 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 COQ5Q5HYK3 327 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 SAMD4BQ5PRF9 694 aaKnown RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 C1orf146Q5VVC0 180 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 GPR107Q5VW38 600 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 FAM45BPQ6NSW5 357 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 REEP3Q6NUK4 255 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 RWDD4Q6NW29 188 aaKnown RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 PRMT9Q6P2P2 845 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 SPESP1Q6UW49 350 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 UQCC3Q6UW78 93 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 FAM151BQ6UXP7 276 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 PLEKHG7Q6ZR37 379 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 DCXRQ7Z4W1 244 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 RPS19BP1Q86WX3 136 aaKnown RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 PLCZ1Q86YW0 608 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 C10orf107Q8IVU9 208 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR2L13Q8N349 312 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 ATPAF2Q8N5M1 289 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 FAM71E2Q8N5Q1 922 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 TMEM252Q8N6L7 170 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 TTC29Q8NA56 475 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR5T1Q8NG75 326 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR52E5Q8NH55 327 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 PLPPR1Q8TBJ4 325 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 FAM45AQ8TCE6 357 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 LGALS14Q8TCE9 139 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 RORBQ92753 470 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 CMTM5Q96DZ9 223 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 L3HYPDHQ96EM0 354 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF641Q96N77 438 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 FOPNLQ96NB1 174 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 CLCC1Q96S66 551 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 RNF2Q99496 336 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 TMEM246Q9BRR3 403 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 PELOQ9BRX2 385 aaKnown RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 C9orf16Q9BUW7 83 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 POTEKPQ9BYX7 375 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 C20orf27Q9GZN8 174 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 DERL2Q9GZP9 239 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 SLC38A1Q9H2H9 487 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 KIR3DX1Q9H7L2 352 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 POLE4Q9NR33 117 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 NLE1Q9NVX2 485 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 PAK1IP1Q9NWT1 392 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF229Q9UJW7 825 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF225Q9UK10 706 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 PSMD13Q9UNM6 376 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 FLVCR2Q9UPI3 526 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 POFUT2Q9Y2G5 429 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 SNX10Q9Y5X0 201 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 KPTNQ9Y664 436 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 HEATR1Q9H583 2144 aaKnown RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 IGHV3OR16-13A0A075B7E8 117 aa1.39□□□□□ -2.19
HMGB1P18-201ENST00000438801 A0A0D9SEW6 157 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms