RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 J3QR06 171 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 SPINT2O43291 252 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 SCTP09683 121 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 CD3GP09693 182 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 IGHV3-43DP0DP04 118 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 PTHLHP12272 177 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 DTYMKP23919 212 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 NFYBP25208 207 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 MNDAP41218 407 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 RIPPLY3P57055 190 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 SCGB2A2Q13296 93 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 GNMTQ14749 295 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 HERPUD1Q15011 391 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 HLA-DRB5Q30154 266 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 TMEM30BQ3MIR4 351 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 Q3ZCU0 254 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 MORN2Q502X0 79 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 IZUMO1Q8IYV9 350 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 DTX3Q8N9I9 347 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 OR52L2PQ8NGH6 319 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 OR9G1Q8NH87 305 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 NUDCD2Q8WVJ2 157 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 AP3S1Q92572 193 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 S100A16Q96FQ6 103 aaKnown RBP10.05□□□□□ -0.8
USP40-205ENST00000430158 TOLLIPQ9H0E2 274 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 DIABLOQ9NR28 239 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 KCNIP1Q9NZI2 227 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 ZNF230Q9UIE0 474 aaPredicted RBP10.05□□□□□ -0.8
USP40-205ENST00000430158 TBL2Q9Y4P3 447 aaKnown RBP10.05□□□□□ -0.8
USP40-205ENST00000430158 STAB1Q9NY15 2570 aa10.05□□□□□ -0.8
USP40-205ENST00000430158 A0A0A6YYJ9 748 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 A6NHS1 94 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 TRDCB7Z8K6 153 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 BUB1B-PAK6H3BSN5 160 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 SDCBPO00560 298 aaPredicted RBP10.04□□□□□ -0.8
USP40-205ENST00000430158 SLC31A2O15432 143 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 IGHV3-7P01780 117 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 ARG1P05089 322 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 PAX6P26367 422 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 TAS2R20P59543 309 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 HLA-DRB3P79483 266 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 LTC4SQ16873 150 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 CT45A1Q5HYN5 189 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 MINOS1Q5TGZ0 78 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 CT45A3Q8NHU0 189 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 PIFOQ8TCI5 191 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 MAFIPQ8WZ33 124 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 ST6GALNAC6Q969X2 333 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 DGCR14Q96DF8 476 aaKnown RBP10.04□□□□□ -0.8
USP40-205ENST00000430158 OCSTAMPQ9BR26 566 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 CHMP1AQ9HD42 196 aaPredicted RBP10.04□□□□□ -0.8
USP40-205ENST00000430158 ANAPC10Q9UM13 185 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 MGAT4AQ9UM21 535 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 MINOS1-NBL1R4GNA1 71 aa10.04□□□□□ -0.8
USP40-205ENST00000430158 A0A1W2PPE3 182 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 VGLL3A8MV65 326 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 CLDN34H7C241 214 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 YPEL1O60688 119 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 NOL3O60936 208 aaKnown RBP10.03□□□□□ -0.8
USP40-205ENST00000430158 DIRAS3O95661 229 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 GSTT2P0CG29 244 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 GSTT2BP0CG30 244 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 SOX6P35712 828 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 IER3P46695 156 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 PITPNAQ00169 270 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 SRSF2Q01130 221 aaKnown RBP10.03□□□□□ -0.8
USP40-205ENST00000430158 ARFRP1Q13795 201 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 SLC9A3R2Q15599 337 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 AANATQ16613 207 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 STEAP3Q658P3 488 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 MZT2AQ6P582 158 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 SLC25A48Q6ZT89 311 aaKnown RBP10.03□□□□□ -0.8
USP40-205ENST00000430158 GALMQ96C23 342 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 MALSU1Q96EH3 234 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 YPEL2Q96QA6 119 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 SOSTQ9BQB4 213 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 CABLES2Q9BTV7 478 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 PARP12Q9H0J9 701 aaKnown RBP10.03□□□□□ -0.8
USP40-205ENST00000430158 MMP28Q9H239 520 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 OR2S2Q9NQN1 319 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 NDUFA13Q9P0J0 144 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 DPM3Q9P2X0 92 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 JPT1Q9UK76 154 aa10.03□□□□□ -0.8
USP40-205ENST00000430158 TENM1Q9UKZ4 2725 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 DNAJC9-AS1A6NH13 148 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 FABP7O15540 132 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 TCF21O43680 179 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 TPPPO94811 219 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 IFNA2P01563 188 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 FBP1P09467 338 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 HTR1DP28221 377 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 PPP1CCP36873 323 aaKnown RBP10.02□□□□□ -0.81
USP40-205ENST00000430158 ZNF137PP52743 207 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 PRRX1P54821 245 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 DIAPH2-AS1Q14236 149 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 IGSF11Q5DX21 431 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 TMEM69Q5SWH9 247 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 HOGA1Q86XE5 327 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 LAX1Q8IWV1 398 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 ODF3L1Q8IXM7 274 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms