RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 RBM24Q9BX46 236 aaKnown RBP9.78□□□□□ -0.84
CECR3-201ENST00000428828 C1orf123Q9NWV4 160 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 KLHDC2Q9Y2U9 406 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 A0A1B0GU03 582 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 DHRS7CA6NNS2 312 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 OR4A8P0C604 315 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 ECI1P42126 302 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 OR3A2P47893 321 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 RND3P61587 244 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 AADACL3Q5VUY0 350 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 SMIM15Q7Z3B0 74 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 CATSPERDQ86XM0 798 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 SGPP2Q8IWX5 399 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 STARD4Q96DR4 205 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 ZNF837Q96EG3 531 aaPredicted RBP9.78□□□□□ -0.84
CECR3-201ENST00000428828 DIRC2Q96SL1 478 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 IMMP2LQ96T52 175 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 RTBDNQ9BSG5 229 aaPredicted RBP9.78□□□□□ -0.84
CECR3-201ENST00000428828 FAAP24Q9BTP7 215 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 SFXN3Q9BWM7 321 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 KCNK15Q9H427 330 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 RHBDD3Q9Y3P4 386 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 URGCP-MRPS24S4R325 110 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 WIPF3A6NGB9 483 aa9.77□□□□□ -0.85
CECR3-201ENST00000428828 NKX6-3A6NJ46 265 aa9.77□□□□□ -0.85
CECR3-201ENST00000428828 H0YL77 283 aa9.77□□□□□ -0.85
CECR3-201ENST00000428828 SCAF4O95104 1147 aaKnown RBP9.77□□□□□ -0.85
CECR3-201ENST00000428828 HLA-DQA2P01906 255 aa9.77□□□□□ -0.85
CECR3-201ENST00000428828 CDAP32320 146 aa9.77□□□□□ -0.85
CECR3-201ENST00000428828 PPP1CCP36873 323 aaKnown RBP9.77□□□□□ -0.85
CECR3-201ENST00000428828 FOXG1P55316 489 aaPredicted RBP9.77□□□□□ -0.85
CECR3-201ENST00000428828 TAF9Q16594 264 aa9.77□□□□□ -0.85
CECR3-201ENST00000428828 CEACAM16Q2WEN9 425 aa9.77□□□□□ -0.85
CECR3-201ENST00000428828 WDR38Q5JTN6 314 aa9.77□□□□□ -0.85
CECR3-201ENST00000428828 SPSB3Q6PJ21 355 aa9.77□□□□□ -0.85
CECR3-201ENST00000428828 DPPA3Q6W0C5 159 aa9.77□□□□□ -0.85
CECR3-201ENST00000428828 SSX7Q7RTT5 188 aa9.77□□□□□ -0.85
CECR3-201ENST00000428828 ORAOV1Q8WV07 137 aa9.77□□□□□ -0.85
CECR3-201ENST00000428828 EMG1Q92979 244 aaKnown RBP9.77□□□□□ -0.85
CECR3-201ENST00000428828 RARRES2Q99969 163 aa9.77□□□□□ -0.85
CECR3-201ENST00000428828 B9D1Q9UPM9 204 aa9.77□□□□□ -0.85
CECR3-201ENST00000428828 DHDHQ9UQ10 334 aa9.77□□□□□ -0.85
CECR3-201ENST00000428828 COA3Q9Y2R0 106 aaPredicted RBP9.77□□□□□ -0.85
CECR3-201ENST00000428828 WSB1Q9Y6I7 421 aa9.77□□□□□ -0.85
CECR3-201ENST00000428828 NXPH2O95156 264 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 GSTP1P09211 210 aaKnown RBP9.76□□□□□ -0.85
CECR3-201ENST00000428828 IRF2P14316 349 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 HNF1AP20823 631 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 OPRM1P35372 400 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 ICAM4Q14773 271 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 SLC9A3R2Q15599 337 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 HIST3H3Q16695 136 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 IAH1Q2TAA2 248 aaPredicted RBP9.76□□□□□ -0.85
CECR3-201ENST00000428828 ACOT6Q3I5F7 207 aaPredicted RBP9.76□□□□□ -0.85
CECR3-201ENST00000428828 DNM1P34Q6PK57 102 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 MRPL41Q8IXM3 137 aaKnown RBP9.76□□□□□ -0.85
CECR3-201ENST00000428828 PLPP7Q8NBV4 271 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 TMEM104Q8NE00 496 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 TMEM170AQ8WVE7 144 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 ERGIC1Q969X5 290 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 PCGF1Q9BSM1 259 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 GPR35Q9HC97 309 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 AURKAIP1Q9NWT8 199 aaPredicted RBP9.76□□□□□ -0.85
CECR3-201ENST00000428828 FKBP11Q9NYL4 201 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 IKZF2Q9UKS7 526 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 POLR3KQ9Y2Y1 108 aaPredicted RBP9.76□□□□□ -0.85
CECR3-201ENST00000428828 CACNA1CQ13936 2221 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 IGLV1-36A0A0B4J1U3 117 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 XKRY2A2RUG3 117 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 GEMIN2O14893 280 aaKnown RBP9.76□□□□□ -0.85
CECR3-201ENST00000428828 DHHO43323 396 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 MPZL1O95297 269 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 BPNT1O95861 308 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 HPRT1P00492 218 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 CGAP01215 116 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 HBE1P02100 147 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 B4GALT1P15291 398 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 ADORA2A-AS1P86434 159 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 MEP1BQ16820 701 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 SLC25A47Q6Q0C1 308 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 GVQW1Q8N7I0 195 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 OR2D3Q8NGH3 330 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 HIST1H2AAQ96QV6 131 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 OR8B4Q96RC9 309 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 LINC00470Q9BZP3 86 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 DNAJC4Q9NNZ3 241 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 PLSCR4Q9NRQ2 329 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 GSKIPQ9P0R6 139 aa9.76□□□□□ -0.85
CECR3-201ENST00000428828 A6NNC1 897 aa9.75□□□□□ -0.85
CECR3-201ENST00000428828 FAM90A27PA6NNH2 459 aa9.75□□□□□ -0.85
CECR3-201ENST00000428828 NDUFS8O00217 210 aa9.75□□□□□ -0.85
CECR3-201ENST00000428828 TCF21O43680 179 aa9.75□□□□□ -0.85
CECR3-201ENST00000428828 CA11O75493 328 aa9.75□□□□□ -0.85
CECR3-201ENST00000428828 LYZL6O75951 148 aa9.75□□□□□ -0.85
CECR3-201ENST00000428828 DIRAS3O95661 229 aa9.75□□□□□ -0.85
CECR3-201ENST00000428828 IFNA21P01568 189 aa9.75□□□□□ -0.85
CECR3-201ENST00000428828 SERPINA2P20848 420 aa9.75□□□□□ -0.85
CECR3-201ENST00000428828 RPL29P47914 159 aaKnown RBP9.75□□□□□ -0.85
CECR3-201ENST00000428828 FHITP49789 147 aa9.75□□□□□ -0.85
CECR3-201ENST00000428828 FAM3BP58499 235 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms