RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 STEAP1Q9UHE8 339 aa11.88□□□□□ -0.51
RTN4-210ENST00000427710 AK3Q9UIJ7 227 aa11.88□□□□□ -0.51
RTN4-210ENST00000427710 TRAV1-2A0A0B4J238 106 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 OOSP1A8MZH6 123 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 HSD17B6O14756 317 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 CA11O75493 328 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 TSPAN15O95858 294 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 PPP1CCP36873 323 aaKnown RBP11.87□□□□□ -0.51
RTN4-210ENST00000427710 VDAC2P45880 294 aaPredicted RBP11.87□□□□□ -0.51
RTN4-210ENST00000427710 TMEM50BP56557 158 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 HERPUD1Q15011 391 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 NEDD8Q15843 81 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 ABCA11PQ4W5N1 156 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 CT45A1Q5HYN5 189 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 TREML4Q6UXN2 200 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 NR2C2APQ86WQ0 139 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 Q8N2B8 174 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 LINC00311Q8N616 119 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 ZNF439Q8NDP4 499 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 CT45A3Q8NHU0 189 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 ARHGAP5-AS1Q96IT6 56 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 URM1Q9BTM9 101 aaKnown RBP11.87□□□□□ -0.51
RTN4-210ENST00000427710 OR51E2Q9H255 320 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 LIN7BQ9HAP6 207 aa11.87□□□□□ -0.51
RTN4-210ENST00000427710 TXNL4BQ9NX01 149 aaKnown RBP11.87□□□□□ -0.51
RTN4-210ENST00000427710 IGHV1-3A0A0C4DH29 117 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 FAM90A9PA6NNJ1 464 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 FOXI3A8MTJ6 420 aaPredicted RBP11.86□□□□□ -0.51
RTN4-210ENST00000427710 PDCD5O14737 125 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 LDLRAD4O15165 306 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 OR2F2O95006 317 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 IGKV1D-33P01593 117 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 IGKV1-33P01594 117 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 AMY1AP04745 511 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 AMY2AP04746 511 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 LPLP06858 475 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 CD28P10747 220 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 SLC2A2P11168 524 aaPredicted RBP11.86□□□□□ -0.51
RTN4-210ENST00000427710 RAB3BP20337 219 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 RAB7AP51149 207 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 C9orf152Q5JTZ5 239 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 TRAT1Q6PIZ9 186 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 Q6ZTK2 550 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 FAM89BQ8N5H3 189 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 FCGR1BQ92637 280 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 OCSTAMPQ9BR26 566 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 PECRQ9BY49 303 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 RNF167Q9H6Y7 350 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 OR2S2Q9NQN1 319 aa11.86□□□□□ -0.51
RTN4-210ENST00000427710 NOTCH3Q9UM47 2321 aa11.85□□□□□ -0.51
RTN4-210ENST00000427710 ZNF736B4DX44 427 aaPredicted RBP11.85□□□□□ -0.51
RTN4-210ENST00000427710 H3BUI4 141 aa11.85□□□□□ -0.51
RTN4-210ENST00000427710 M0QZ24 198 aa11.85□□□□□ -0.51
RTN4-210ENST00000427710 NAPSAO96009 420 aa11.85□□□□□ -0.51
RTN4-210ENST00000427710 GAPDHP04406 335 aaKnown RBP11.85□□□□□ -0.51
RTN4-210ENST00000427710 FAM106CPP0CH98 169 aa11.85□□□□□ -0.51
RTN4-210ENST00000427710 TMEM11P17152 192 aa11.85□□□□□ -0.51
RTN4-210ENST00000427710 ZNF816Q0VGE8 651 aaPredicted RBP11.85□□□□□ -0.51
RTN4-210ENST00000427710 HMGN3Q15651 99 aa11.85□□□□□ -0.51
RTN4-210ENST00000427710 MOGAT2Q3SYC2 334 aa11.85□□□□□ -0.51
RTN4-210ENST00000427710 MORN2Q502X0 79 aa11.85□□□□□ -0.51
RTN4-210ENST00000427710 PLAC9Q5JTB6 97 aa11.85□□□□□ -0.51
RTN4-210ENST00000427710 ZNF880Q6PDB4 577 aa11.85□□□□□ -0.51
RTN4-210ENST00000427710 SLC25A48Q6ZT89 311 aaKnown RBP11.85□□□□□ -0.51
RTN4-210ENST00000427710 C16orf82Q7Z2V1 217 aa11.85□□□□□ -0.51
RTN4-210ENST00000427710 OR8H3Q8N146 312 aa11.85□□□□□ -0.51
RTN4-210ENST00000427710 FAM110DQ8TAY7 271 aaPredicted RBP11.85□□□□□ -0.51
RTN4-210ENST00000427710 ST6GALNAC6Q969X2 333 aa11.85□□□□□ -0.51
RTN4-210ENST00000427710 RAB9BQ9NP90 201 aa11.85□□□□□ -0.51
RTN4-210ENST00000427710 STUB1Q9UNE7 303 aa11.85□□□□□ -0.51
RTN4-210ENST00000427710 IFITM5A6NNB3 132 aa11.84□□□□□ -0.51
RTN4-210ENST00000427710 PEX14O75381 377 aa11.84□□□□□ -0.51
RTN4-210ENST00000427710 CLEC2LP0C7M8 214 aa11.84□□□□□ -0.51
RTN4-210ENST00000427710 IL3RAP26951 378 aa11.84□□□□□ -0.51
RTN4-210ENST00000427710 PSMD7P51665 324 aa11.84□□□□□ -0.51
RTN4-210ENST00000427710 NSUN5P1Q3KNT7 163 aa11.84□□□□□ -0.51
RTN4-210ENST00000427710 THNSL2Q86YJ6 484 aa11.84□□□□□ -0.51
RTN4-210ENST00000427710 C8orf31Q8N9H6 132 aa11.84□□□□□ -0.51
RTN4-210ENST00000427710 RTN4IP1Q8WWV3 396 aaPredicted RBP11.84□□□□□ -0.51
RTN4-210ENST00000427710 IL1F10Q8WWZ1 152 aa11.84□□□□□ -0.51
RTN4-210ENST00000427710 CHCHD6Q9BRQ6 235 aa11.84□□□□□ -0.51
RTN4-210ENST00000427710 RAB22AQ9UL26 194 aa11.84□□□□□ -0.51
RTN4-210ENST00000427710 MOB4Q9Y3A3 225 aa11.84□□□□□ -0.51
RTN4-210ENST00000427710 A0A075B6Q4 140 aa11.83□□□□□ -0.52
RTN4-210ENST00000427710 LOC100506127A0A0U1RQW1 187 aa11.83□□□□□ -0.52
RTN4-210ENST00000427710 FBXO24O75426 580 aa11.83□□□□□ -0.52
RTN4-210ENST00000427710 GADD45AP24522 165 aa11.83□□□□□ -0.52
RTN4-210ENST00000427710 KCTD21Q4G0X4 260 aa11.83□□□□□ -0.52
RTN4-210ENST00000427710 C11orf88Q6PI97 169 aa11.83□□□□□ -0.52
RTN4-210ENST00000427710 C10orf99Q6UWK7 81 aa11.83□□□□□ -0.52
RTN4-210ENST00000427710 GALMQ96C23 342 aa11.83□□□□□ -0.52
RTN4-210ENST00000427710 AKR1E2Q96JD6 320 aa11.83□□□□□ -0.52
RTN4-210ENST00000427710 ABHD14AQ9BUJ0 271 aa11.83□□□□□ -0.52
RTN4-210ENST00000427710 WNT10AQ9GZT5 417 aa11.83□□□□□ -0.52
RTN4-210ENST00000427710 PARP12Q9H0J9 701 aaKnown RBP11.83□□□□□ -0.52
RTN4-210ENST00000427710 JPT1Q9UK76 154 aa11.83□□□□□ -0.52
RTN4-210ENST00000427710 SSR3Q9UNL2 185 aa11.83□□□□□ -0.52
RTN4-210ENST00000427710 NOTCH1P46531 2555 aa11.83□□□□□ -0.52
RTN4-210ENST00000427710 SCTP09683 121 aa11.82□□□□□ -0.52
RTN4-210ENST00000427710 GNB3P16520 340 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms