RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 CGB3P0DN86 165 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 CGB7P0DN87 165 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 IGHV1-8P0DP01 117 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 RAB6AP20340 208 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 FUT3P21217 361 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 COX7A1P24310 79 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 CHATP28329 748 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 BTCP35070 178 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 C17orf58Q2M2W7 97 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 NKAPLQ5M9Q1 402 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 C6orf201Q7Z4U5 140 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 OR52I2Q8NH67 350 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 MRGPRDQ8TDS7 321 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 CCDC107Q8WV48 283 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 TAF15Q92804 592 aaKnown RBP eCLIP12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 SULT4A1Q9BR01 284 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 AUNIPQ9H7T9 357 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 UBE2J1Q9Y385 318 aaPredicted RBP12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 NUBP2Q9Y5Y2 271 aa12.78□□□□□ -0.36
CLK3P2-201ENST00000427566 TMEM89A2RUT3 159 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 FAM172BPA6NC97 362 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 MCRIP1C9JLW8 97 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 INMT-MINDY4F8WBC2 141 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 FBP1P09467 338 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 SAA4P35542 130 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 GLP1RP43220 463 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 KCNJ3P48549 501 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 VEGFCP49767 419 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 UBE2E1P51965 193 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 PAX5Q02548 391 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 PRAMEF5Q5TYX0 476 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 SLC35E4Q6ICL7 350 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 ZNF497Q6ZNH5 498 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 FAM89BQ8N5H3 189 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 C17orf50Q8WW18 174 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 FAAP24Q9BTP7 215 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 FBLN5Q9UBX5 448 aa12.77□□□□□ -0.37
CLK3P2-201ENST00000427566 ANKRD20A5PA0PJZ0 165 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 FOXI3A8MTJ6 420 aaPredicted RBP12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 CLDN34H7C241 214 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 CCNKO75909 580 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 MT-ND4P03905 459 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 CRYBA1P05813 215 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 PAX6P26367 422 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 BLVRBP30043 206 aaPredicted RBP12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 EIF2B2P49770 351 aaKnown RBP12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 RAG2P55895 527 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 TMEM50BP56557 158 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 SSBP1Q04837 148 aaKnown RBP12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 CD300CQ08708 224 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 TATDN3Q17R31 274 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 MOGAT2Q3SYC2 334 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 RNASE12Q5GAN4 147 aaKnown RBP12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 C5orf24Q7Z6I8 188 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 C3orf56Q8N813 242 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 OR4K15Q8NH41 348 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 RFESDQ8TAC1 157 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 UBALD1Q8TB05 177 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 SSMEM1Q8WWF3 244 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 CHIAQ9BZP6 476 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 PRDM13Q9H4Q3 707 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 HEXA-AS1Q9H8Q6 139 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 SPACA1Q9HBV2 294 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 TAS2R8Q9NYW2 309 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 TAS2R3Q9NYW6 316 aa12.76□□□□□ -0.37
CLK3P2-201ENST00000427566 A0A0B4J293 547 aa12.75□□□□□ -0.37
CLK3P2-201ENST00000427566 SULT1C2O00338 296 aa12.75□□□□□ -0.37
CLK3P2-201ENST00000427566 SCGNO76038 276 aa12.75□□□□□ -0.37
CLK3P2-201ENST00000427566 DHFRP00374 187 aa12.75□□□□□ -0.37
CLK3P2-201ENST00000427566 IGHV4-59P01825 116 aa12.75□□□□□ -0.37
CLK3P2-201ENST00000427566 HKR1P10072 659 aa12.75□□□□□ -0.37
CLK3P2-201ENST00000427566 SSTR5P35346 364 aa12.75□□□□□ -0.37
CLK3P2-201ENST00000427566 OLFML2AQ68BL7 652 aa12.75□□□□□ -0.37
CLK3P2-201ENST00000427566 AJUBAQ96IF1 538 aa12.75□□□□□ -0.37
CLK3P2-201ENST00000427566 URM1Q9BTM9 101 aaKnown RBP12.75□□□□□ -0.37
CLK3P2-201ENST00000427566 ATG5Q9H1Y0 275 aa12.75□□□□□ -0.37
CLK3P2-201ENST00000427566 NCOR1P1Q9H4R4 102 aa12.75□□□□□ -0.37
CLK3P2-201ENST00000427566 OR6C3Q9NZP0 311 aa12.75□□□□□ -0.37
CLK3P2-201ENST00000427566 RAB22AQ9UL26 194 aa12.75□□□□□ -0.37
CLK3P2-201ENST00000427566 KBTBD11-OT1A0A1B0GTJ5 212 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 TMEM30CPA0ZSE6 113 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 BTBD17A6NE02 478 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 FAM181BA6NEQ2 426 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 ZNF729A6NN14 1252 aaPredicted RBP12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 RBBP9O75884 186 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 RBP4P02753 201 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 TCRBP04435 133 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 LGALS4P56470 323 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 FOXL1Q12952 345 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 RBM39Q14498 530 aaKnown RBP12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 AWAT1Q58HT5 328 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 PLAC9Q5JTB6 97 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 LDLRAD2Q5SZI1 272 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 HEPN1Q6WQI6 88 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 Q6ZPA2 131 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 GAPTQ8N292 157 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 ZNF565Q8N9K5 539 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 OR6F1Q8NGZ6 308 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 ARHGAP5-AS1Q96IT6 56 aa12.74□□□□□ -0.37
CLK3P2-201ENST00000427566 GAL3ST2Q9H3Q3 398 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms