RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 PRTFDC1Q9NRG1 225 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 ZNF586Q9NXT0 402 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 IL36RNQ9UBH0 155 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 HIGD1AQ9Y241 93 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 MRPS16Q9Y3D3 137 aaKnown RBP2.37□□□□□ -2.03
PMS1-209ENST00000424059 RNF17Q9BXT8 1623 aaKnown RBP2.37□□□□□ -2.03
PMS1-209ENST00000424059 CUX1P39880 1505 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 TOPBP1Q92547 1522 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 ABCA3Q99758 1704 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 TANC1Q9C0D5 1861 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 IGHV1-69-2A0A0G2JMI3 117 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 LOC102725191A0A1B0GVB3 256 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 FAM231BA6NCW3 169 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 C15orf61A6NNL5 157 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 HMSDA8MTL9 139 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 B4DEV8 164 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 F8VVB4 439 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 F8VWA3 439 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 H0YJW9 148 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 GAPDHSO14556 408 aaPredicted RBP2.37□□□□□ -2.03
PMS1-209ENST00000424059 PLPP2O43688 288 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 CDRT1O95170 752 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 KLF8O95600 359 aaPredicted RBP2.37□□□□□ -2.03
PMS1-209ENST00000424059 CD8AP01732 235 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 APOA2P02652 100 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 REG1AP05451 166 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 H2AFZP0C0S5 128 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 FAM106CPP0CH98 169 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 AKAIN1P0CW23 69 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 GATA1P15976 413 aaPredicted RBP2.37□□□□□ -2.03
PMS1-209ENST00000424059 NTF3P20783 257 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 EMP1P54849 157 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 IL10RBQ08334 325 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 FAM27E3Q08E93 113 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 MELKQ14680 651 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 PMVKQ15126 192 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 HMGN3Q15651 99 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 ACSF3Q4G176 576 aaPredicted RBP2.37□□□□□ -2.03
PMS1-209ENST00000424059 FAM106AQ4KMX7 169 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 DMRTC1Q5HYR2 192 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 FAM182AQ5T1J6 154 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 BCL2L15Q5TBC7 163 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 C9orf57Q5W0N0 161 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 OR10K2Q6IF99 312 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 MFSD12Q6NUT3 480 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 CNIH2Q6PI25 160 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 TEX43Q6ZNM6 134 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 PRSS45Q7RTY3 260 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 PPP1R27Q86WC6 154 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 SLC22A18ASQ8N1D0 253 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 LRRC57Q8N9N7 239 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 ADAD2Q8NCV1 583 aaKnown RBP2.37□□□□□ -2.03
PMS1-209ENST00000424059 ZNF740Q8NDX6 193 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 OR6K6Q8NGW6 343 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 C8orf46Q8TAG6 207 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 RDH5Q92781 318 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 UPRTQ96BW1 309 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 RTP4Q96DX8 246 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 OR4K3Q96R72 315 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 FAM173AQ9BQD7 235 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 COA1Q9GZY4 146 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 POLR2J3Q9H1A7 115 aaKnown RBP2.37□□□□□ -2.03
PMS1-209ENST00000424059 OR2D2Q9H210 308 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 SH3BGRL3Q9H299 93 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 VSIRQ9H7M9 311 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 APOBEC3GQ9HC16 384 aaKnown RBP2.37□□□□□ -2.03
PMS1-209ENST00000424059 SH2D2AQ9NP31 389 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 KCNJ16Q9NPI9 418 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 TAS2R8Q9NYW2 309 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 DNAJC27Q9NZQ0 273 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 LSM7Q9UK45 103 aaKnown RBP2.37□□□□□ -2.03
PMS1-209ENST00000424059 CYSLTR1Q9Y271 337 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 ZNF443Q9Y2A4 671 aaPredicted RBP2.37□□□□□ -2.03
PMS1-209ENST00000424059 LSM5Q9Y4Y9 91 aaKnown RBP2.37□□□□□ -2.03
PMS1-209ENST00000424059 LSM4Q9Y4Z0 139 aaKnown RBP2.37□□□□□ -2.03
PMS1-209ENST00000424059 V9GYH0 126 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 XIRP1Q702N8 1843 aaKnown RBP2.37□□□□□ -2.03
PMS1-209ENST00000424059 ABCA6Q8N139 1617 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 MADDQ8WXG6 1647 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 CC2D2AQ9P2K1 1620 aa2.37□□□□□ -2.03
PMS1-209ENST00000424059 EFCAB5A4FU69 1503 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 ZNF106Q9H2Y7 1883 aaKnown RBP2.36□□□□□ -2.03
PMS1-209ENST00000424059 SCN4AP35499 1836 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 KIF13BQ9NQT8 1826 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 ZNF638Q14966 1978 aaKnown RBP2.36□□□□□ -2.03
PMS1-209ENST00000424059 LOC107984640A0A0U1RRK4 108 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 BTNL10A8MVZ5 291 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 H3BMH7 237 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 H3BQ15 152 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 CCDC179H3BU77 68 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 NME4O00746 187 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 TAX1BP3O14907 124 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 STK17BO94768 372 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 PPP1R3DO95685 299 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 LINC00694P0DN24 101 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 ERGP11308 486 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 PGCP20142 388 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 TNFSF8P32971 234 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 SSR4P51571 173 aa2.36□□□□□ -2.03
PMS1-209ENST00000424059 ZNF140P52738 457 aaPredicted RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms