RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 C1orf123Q9NWV4 160 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 OR5AC2Q9NZP5 309 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 IGHV2OR16-5A0A0B4J2B6 119 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 C9JQL5 133 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 RHBDL1O75783 438 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 CTXN2P0C2S0 81 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 FCGR2CP31995 323 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 CD80P33681 288 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 MPV17P39210 176 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 UCP3P55916 312 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 PIGPP57054 158 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 FXYD4P59646 89 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 RAB32Q13637 225 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 MBNL2Q5VZF2 373 aaKnown RBP14.04□□□□□ -0.16
CMTM3-202ENST00000424011 ZNF474Q6S9Z5 364 aaPredicted RBP14.04□□□□□ -0.16
CMTM3-202ENST00000424011 SUMF2Q8NBJ7 301 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 MUCL1Q96DR8 90 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 MISP3Q96FF7 219 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 KIRREL1Q96J84 757 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 AKR1E2Q96JD6 320 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 GSKIPQ9P0R6 139 aa14.04□□□□□ -0.16
CMTM3-202ENST00000424011 C1QTNF9BB2RNN3 333 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 TIMM8AO60220 97 aaPredicted RBP14.03□□□□□ -0.16
CMTM3-202ENST00000424011 SNRNP70P08621 437 aaKnown RBP14.03□□□□□ -0.16
CMTM3-202ENST00000424011 C1QTNF9P0C862 333 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 LYL1P12980 280 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 ZNF154Q13106 437 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 CLINT1Q14677 625 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 C21orf62-AS1Q17RA5 79 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 ABCA11PQ4W5N1 156 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 PRSS54Q6PEW0 395 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 UNQ6494/PRO21346Q6UXR6 183 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 ZNF488Q96MN9 340 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 KCNIP3Q9Y2W7 256 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 POMT1Q9Y6A1 747 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 IGF2RP11717 2491 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 MSGN1A6NI15 193 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 TSTD3H0UI37 97 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 DEGS1O15121 323 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 DUSP1P28562 367 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 DVL1P1P54792 670 aaPredicted RBP14.03□□□□□ -0.16
CMTM3-202ENST00000424011 HERV-K104P61576 105 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 MZT1Q08AG7 82 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 WDR86Q86TI4 376 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 RPRMLQ8N4K4 120 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 FAM24BQ8N5W8 94 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 MOB3AQ96BX8 217 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 CXXC4Q9H2H0 198 aa14.03□□□□□ -0.16
CMTM3-202ENST00000424011 TRBV6-6A0A0A6YYG2 114 aa14.02□□□□□ -0.16
CMTM3-202ENST00000424011 H7C1Q1 480 aa14.02□□□□□ -0.16
CMTM3-202ENST00000424011 TK1P04183 234 aa14.02□□□□□ -0.16
CMTM3-202ENST00000424011 PGA5P0DJD9 388 aa14.02□□□□□ -0.16
CMTM3-202ENST00000424011 GLI4P10075 376 aa14.02□□□□□ -0.16
CMTM3-202ENST00000424011 MDH2P40926 338 aaKnown RBP14.02□□□□□ -0.16
CMTM3-202ENST00000424011 CD81P60033 236 aa14.02□□□□□ -0.16
CMTM3-202ENST00000424011 ERVK11-1P61568 191 aa14.02□□□□□ -0.16
CMTM3-202ENST00000424011 ALKBH6Q3KRA9 238 aa14.02□□□□□ -0.16
CMTM3-202ENST00000424011 C5orf24Q7Z6I8 188 aa14.02□□□□□ -0.16
CMTM3-202ENST00000424011 TGIF2LXQ8IUE1 241 aa14.02□□□□□ -0.16
CMTM3-202ENST00000424011 SYT3Q9BQG1 590 aa14.02□□□□□ -0.16
CMTM3-202ENST00000424011 CBY1Q9Y3M2 126 aa14.02□□□□□ -0.16
CMTM3-202ENST00000424011 ATP23Q9Y6H3 246 aa14.02□□□□□ -0.16
CMTM3-202ENST00000424011 TRDCB7Z8K6 153 aa14.02□□□□□ -0.17
CMTM3-202ENST00000424011 CDIPTO14735 213 aa14.02□□□□□ -0.17
CMTM3-202ENST00000424011 DIRAS3O95661 229 aa14.02□□□□□ -0.17
CMTM3-202ENST00000424011 FAM87AP0C7U9 286 aa14.02□□□□□ -0.17
CMTM3-202ENST00000424011 MAS1LP35410 378 aa14.02□□□□□ -0.17
CMTM3-202ENST00000424011 TDGF1P3P51864 188 aa14.02□□□□□ -0.17
CMTM3-202ENST00000424011 KIAA0141Q14154 515 aaPredicted RBP14.02□□□□□ -0.17
CMTM3-202ENST00000424011 IGFBP7Q16270 282 aa14.02□□□□□ -0.17
CMTM3-202ENST00000424011 SP6Q3SY56 376 aa14.02□□□□□ -0.17
CMTM3-202ENST00000424011 SPIN3Q5JUX0 258 aa14.02□□□□□ -0.17
CMTM3-202ENST00000424011 Q8NA96 180 aa14.02□□□□□ -0.17
CMTM3-202ENST00000424011 HSPB6O14558 160 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 HS3ST1O14792 307 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 GRPP07492 148 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 PHLDA2Q53GA4 152 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 CISD2Q8N5K1 135 aaKnown RBP14.01□□□□□ -0.17
CMTM3-202ENST00000424011 RTN4IP1Q8WWV3 396 aaPredicted RBP14.01□□□□□ -0.17
CMTM3-202ENST00000424011 MRPL24Q96A35 216 aaKnown RBP14.01□□□□□ -0.17
CMTM3-202ENST00000424011 TRAV24A0A0B4J272 114 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 C3orf80F5H4A9 247 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 NXPH2O95156 264 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 OR5AC1P0C628 307 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 PAX1P15863 534 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 LPAR6P43657 344 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 FABP6P51161 128 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 S100A10P60903 97 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 GAMTQ14353 236 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 IAH1Q2TAA2 248 aaPredicted RBP14.01□□□□□ -0.17
CMTM3-202ENST00000424011 CCDC71LQ8N9Z2 235 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 UBAC2Q8NBM4 344 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 CA5BP1Q8WTZ4 195 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 FAM122AQ96E09 287 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 MRPL37Q9BZE1 423 aaKnown RBP14.01□□□□□ -0.17
CMTM3-202ENST00000424011 NAA60Q9H7X0 242 aa14.01□□□□□ -0.17
CMTM3-202ENST00000424011 NCOR2Q9Y618 2525 aa14□□□□□ -0.17
CMTM3-202ENST00000424011 SH2D1BO14796 132 aa14□□□□□ -0.17
CMTM3-202ENST00000424011 PPYP01298 95 aa14□□□□□ -0.17
CMTM3-202ENST00000424011 CRYAAP02489 173 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms