RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 MAGEB3O15480 346 aa12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 SPINT2O43291 252 aa12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 EGR2P11161 476 aaPredicted RBP12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 ZNF19P17023 458 aa12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 RAB3AP20336 220 aa12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 POLR2IP36954 125 aaKnown RBP12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 NDPQ00604 133 aa12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 ECSCRQ19T08 205 aa12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 MPV17LQ2QL34 196 aa12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 LPCAT4Q643R3 524 aa12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 CD200R1LQ6Q8B3 271 aa12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 LINC00322Q6ZN03 302 aaPredicted RBP12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 OR52N1Q8NH53 320 aa12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 CASTOR1Q8WTX7 329 aa12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 THAP7Q9BT49 309 aaPredicted RBP12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 KIAA1456Q9P272 454 aa12.79□□□□□ -0.36
CHCHD3-202ENST00000423635 H0Y980 276 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 CDRT1O95170 752 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 IGHV3-11P01762 117 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 CSTBP04080 98 aaKnown RBP12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 TMEM267Q0VDI3 215 aaPredicted RBP12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 FLOT2Q14254 428 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 MORN2Q502X0 79 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 ODF3L1Q8IXM7 274 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 OR10V1Q8NGI7 309 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 OR51A2Q8NGJ7 313 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 C4orf36Q96KX1 117 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 NABP2Q9BQ15 211 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 RSRP1Q9BUV0 290 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 FAM192AQ9GZU8 254 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 GABARAPL1Q9H0R8 117 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 METTL9Q9H1A3 318 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 HIPK2Q9H2X6 1198 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 TUBA4BQ9H853 241 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 DHDHQ9UQ10 334 aa12.78□□□□□ -0.36
CHCHD3-202ENST00000423635 HBZP02008 142 aa12.77□□□□□ -0.37
CHCHD3-202ENST00000423635 CX3CL1P78423 397 aa12.77□□□□□ -0.37
CHCHD3-202ENST00000423635 ATAD3CQ5T2N8 411 aa12.77□□□□□ -0.37
CHCHD3-202ENST00000423635 SYT6Q5T7P8 510 aaPredicted RBP12.77□□□□□ -0.37
CHCHD3-202ENST00000423635 IL34Q6ZMJ4 242 aa12.77□□□□□ -0.37
CHCHD3-202ENST00000423635 GAPTQ8N292 157 aa12.77□□□□□ -0.37
CHCHD3-202ENST00000423635 TRUB1Q8WWH5 349 aaKnown RBP12.77□□□□□ -0.37
CHCHD3-202ENST00000423635 LINC00476Q8WZB0 136 aa12.77□□□□□ -0.37
CHCHD3-202ENST00000423635 TRAPPC2LQ9UL33 140 aa12.77□□□□□ -0.37
CHCHD3-202ENST00000423635 ING4Q9UNL4 249 aa12.77□□□□□ -0.37
CHCHD3-202ENST00000423635 KMT2AQ03164 3969 aa12.77□□□□□ -0.37
CHCHD3-202ENST00000423635 TMEM212A6NML5 194 aa12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 RGS11O94810 467 aa12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 LRRC36Q1X8D7 754 aa12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 AKIRIN2Q53H80 203 aa12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 ZDHHC13Q8IUH4 622 aa12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 STX19Q8N4C7 294 aa12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 ACBD7Q8N6N7 88 aa12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 OR1L1Q8NH94 360 aa12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 CIB1Q99828 191 aa12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 TMED9Q9BVK6 235 aa12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 JAM3Q9BX67 310 aa12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 MRPL20Q9BYC9 149 aaKnown RBP12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 SLA2Q9H6Q3 261 aa12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 RANGRFQ9HD47 186 aaPredicted RBP12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 CNOT2Q9NZN8 540 aaKnown RBP12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 RNF150Q9ULK6 438 aa12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 GMPPBQ9Y5P6 360 aa12.76□□□□□ -0.37
CHCHD3-202ENST00000423635 RBMY1BA6NDE4 496 aaKnown RBP12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 RBMY1EA6NEQ0 496 aaKnown RBP12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 RBMY1DP0C7P1 496 aaKnown RBP12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 ZP3P21754 424 aa12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 KLF5Q13887 457 aaPredicted RBP12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 ATP6AP1Q15904 470 aa12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 ACTBL2Q562R1 376 aa12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 SLC25A30Q5SVS4 291 aa12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 C6orf183Q5T699 404 aa12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 GTSCR1Q86UQ5 136 aa12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 SYS1Q8N2H4 156 aa12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 OR4K15Q8NH41 348 aa12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 OR5AK2Q8NH90 309 aa12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 NEK7Q8TDX7 302 aa12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 PDCD1LG2Q9BQ51 273 aa12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 GABARAPL3Q9BY60 117 aa12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 RETNQ9HD89 108 aa12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 OR2S2Q9NQN1 319 aa12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 PAK1IP1Q9NWT1 392 aaPredicted RBP12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 POMPQ9Y244 141 aa12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 EXOGQ9Y2C4 368 aaKnown RBP12.75□□□□□ -0.37
CHCHD3-202ENST00000423635 FCN1O00602 326 aa12.74□□□□□ -0.37
CHCHD3-202ENST00000423635 ZNF780AO75290 641 aaPredicted RBP12.74□□□□□ -0.37
CHCHD3-202ENST00000423635 TPPP2P59282 170 aa12.74□□□□□ -0.37
CHCHD3-202ENST00000423635 ADARB1P78563 741 aaKnown RBP12.74□□□□□ -0.37
CHCHD3-202ENST00000423635 TRAT1Q6PIZ9 186 aa12.74□□□□□ -0.37
CHCHD3-202ENST00000423635 ZNF833PQ6ZTB9 187 aa12.74□□□□□ -0.37
CHCHD3-202ENST00000423635 PRR18Q8N4B5 295 aa12.74□□□□□ -0.37
CHCHD3-202ENST00000423635 TSEN15Q8WW01 171 aaKnown RBP12.74□□□□□ -0.37
CHCHD3-202ENST00000423635 MS4A10Q96PG2 267 aa12.74□□□□□ -0.37
CHCHD3-202ENST00000423635 MYCBPQ99417 103 aaPredicted RBP12.74□□□□□ -0.37
CHCHD3-202ENST00000423635 ABHD14AQ9BUJ0 271 aa12.74□□□□□ -0.37
CHCHD3-202ENST00000423635 SPACA1Q9HBV2 294 aa12.74□□□□□ -0.37
CHCHD3-202ENST00000423635 SIGLEC8Q9NYZ4 499 aa12.74□□□□□ -0.37
CHCHD3-202ENST00000423635 RCC2Q9P258 522 aaKnown RBP12.74□□□□□ -0.37
CHCHD3-202ENST00000423635 CEPT1Q9Y6K0 416 aa12.74□□□□□ -0.37
CHCHD3-202ENST00000423635 MCRIP1C9JLW8 97 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms