RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 SEC22AQ96IW7 307 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 PDCD10Q9BUL8 212 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 SPACA1Q9HBV2 294 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 PPIAL4AQ9Y536 164 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 MED13LQ71F56 2210 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 NOTCH2Q04721 2471 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 SETXQ7Z333 2677 aaKnown RBP7.44□□□□□ -1.22
HPS4-204ENST00000422379 LRRC30A6NM36 301 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 FAM25EA8MYX2 175 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 IFNL4K9M1U5 179 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 IRF2P14316 349 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 MUC1P15941 1255 aaPredicted RBP7.44□□□□□ -1.22
HPS4-204ENST00000422379 ECI1P42126 302 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 GLIPR1P48060 266 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 EFNA4P52798 201 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 ANKRD55Q3KP44 614 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 C6orf183Q5T699 404 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 FAM53AQ6NSI3 398 aaPredicted RBP7.44□□□□□ -1.22
HPS4-204ENST00000422379 TCF23Q7RTU1 214 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 UBALD1Q8TB05 177 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 NEU4Q8WWR8 484 aaPredicted RBP7.44□□□□□ -1.22
HPS4-204ENST00000422379 C14orf166Q9Y224 244 aaKnown RBP7.44□□□□□ -1.22
HPS4-204ENST00000422379 OTOGQ6ZRI0 2925 aa7.44□□□□□ -1.22
HPS4-204ENST00000422379 IGKV1-6A0A0C4DH72 117 aa7.43□□□□□ -1.22
HPS4-204ENST00000422379 K7N7A8 449 aa7.43□□□□□ -1.22
HPS4-204ENST00000422379 SIGLEC5O15389 551 aa7.43□□□□□ -1.22
HPS4-204ENST00000422379 TMPRSS2O15393 492 aa7.43□□□□□ -1.22
HPS4-204ENST00000422379 CFDP00746 253 aaPredicted RBP7.43□□□□□ -1.22
HPS4-204ENST00000422379 TK1P04183 234 aa7.43□□□□□ -1.22
HPS4-204ENST00000422379 CTSDP07339 412 aaPredicted RBP7.43□□□□□ -1.22
HPS4-204ENST00000422379 MRPS11P82912 194 aaKnown RBP7.43□□□□□ -1.22
HPS4-204ENST00000422379 ITPR3Q14573 2671 aa7.43□□□□□ -1.22
HPS4-204ENST00000422379 HERPUD1Q15011 391 aa7.43□□□□□ -1.22
HPS4-204ENST00000422379 LRRC37A5PQ49AS3 106 aa7.43□□□□□ -1.22
HPS4-204ENST00000422379 SHEQ5VZ18 495 aa7.43□□□□□ -1.22
HPS4-204ENST00000422379 ZNF880Q6PDB4 577 aa7.43□□□□□ -1.22
HPS4-204ENST00000422379 DHRS11Q6UWP2 260 aa7.43□□□□□ -1.22
HPS4-204ENST00000422379 NEK7Q8TDX7 302 aa7.43□□□□□ -1.22
HPS4-204ENST00000422379 TOMM40LQ969M1 308 aa7.43□□□□□ -1.22
HPS4-204ENST00000422379 SEBOXQ9HB31 216 aaPredicted RBP7.43□□□□□ -1.22
HPS4-204ENST00000422379 CHMP1AQ9HD42 196 aaPredicted RBP7.43□□□□□ -1.22
HPS4-204ENST00000422379 KIF25Q9UIL4 384 aa7.43□□□□□ -1.22
HPS4-204ENST00000422379 A0A0B4J2A0 478 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 ADAP1O75689 374 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 C4BPBP20851 252 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 S100A11P31949 105 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 FCGR2CP31995 323 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 FXYD4P59646 89 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 FGL1Q08830 312 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 EXOSC2Q13868 293 aaKnown RBP7.42□□□□□ -1.22
HPS4-204ENST00000422379 EDDM3AQ14507 147 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 UTF1Q5T230 341 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 C11orf87Q6NUJ2 197 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 ZNF841Q6ZN19 808 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 COQ8AQ8NI60 647 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 PPP1R1CQ8WVI7 109 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 CHODLQ9H9P2 273 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 Q9N2K0 584 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 COMMD9Q9P000 198 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 SHPKQ9UHJ6 478 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 GLS2Q9UI32 602 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 ABCA2Q9BZC7 2435 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 TRAV38-1A0A0B4J264 116 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 C13orf42A0A1B0GVH6 325 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 C5orf51A6NDU8 294 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 CRYM-AS1A6NIL9 109 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 MPTX1A8MV57 137 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 PPIHO43447 177 aaKnown RBP7.42□□□□□ -1.22
HPS4-204ENST00000422379 SNAPC5O75971 98 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 GLAP06280 429 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 SCTP09683 121 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 RPA2P15927 270 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 RBM39Q14498 530 aaKnown RBP7.42□□□□□ -1.22
HPS4-204ENST00000422379 SRSF7Q16629 238 aaKnown RBP eCLIP7.42□□□□□ -1.22
HPS4-204ENST00000422379 IGSF11Q5DX21 431 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 GSG1LQ6UXU4 331 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 Q6ZS49 121 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 TMUB2Q71RG4 321 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 C1orf87Q8N0U7 546 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 OR13A1Q8NGR1 328 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 PERPQ96FX8 193 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 SNX22Q96L94 193 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 MFFQ9GZY8 342 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 ARL6Q9H0F7 186 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 NARFLQ9H6Q4 476 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 RAB18Q9NP72 206 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 RDH8Q9NYR8 311 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 FBXO9Q9UK97 447 aaPredicted RBP7.42□□□□□ -1.22
HPS4-204ENST00000422379 MALRD1Q5VYJ5 2156 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 KIAA2026Q5HYC2 2103 aa7.42□□□□□ -1.22
HPS4-204ENST00000422379 TEX15Q9BXT5 2789 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 TRBV6-6A0A0A6YYG2 114 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 ANKRD34BA5PLL1 514 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 ADAM20O43506 726 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 IFNA2P01563 188 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 ZNF728P0DKX0 622 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 SLC25A4P12235 298 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 AADACP22760 399 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 GLP1RP43220 463 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 PIGPP57054 158 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms