RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 ELANEP08246 267 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 OR5H8P0DN80 308 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 FUT3P21217 361 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 VDAC1P21796 283 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 SOX6P35712 828 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 CAPGP40121 348 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 WNT4P56705 351 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 GPR50Q13585 617 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 CT45A1Q5HYN5 189 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 DEFB121Q5J5C9 76 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 FAM53AQ6NSI3 398 aaPredicted RBP9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 UNQ9370/PRO34162Q6UXP9 181 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 LYPD6Q86Y78 171 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 C8orf59Q8N0T1 100 aaPredicted RBP9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 PRR18Q8N4B5 295 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 FAM71E2Q8N5Q1 922 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 OR1L1Q8NH94 360 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 CT45A3Q8NHU0 189 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 TFAP2CQ92754 450 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 RAX2Q96IS3 184 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 BANF2Q9H503 90 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 PLSCR3Q9NRY6 295 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 MBNL3Q9NUK0 354 aaKnown RBP9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 KCNIP1Q9NZI2 227 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 JPT1Q9UK76 154 aa9.08□□□□□ -0.96
SQSTM1-203ENST00000422245 LINC01548A6NM66 108 aa9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 ZNF736B4DX44 427 aaPredicted RBP9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 CCL24O00175 119 aa9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 IGHG4P01861 327 aa9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 RPLP1P05386 114 aaKnown RBP9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 UBBP0CG47 229 aa9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 RCC1P18754 421 aaPredicted RBP9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 CELP19835 753 aa9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 CDX1P47902 265 aaPredicted RBP9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 ZNF134P52741 427 aa9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 CFHR3Q02985 330 aa9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 LSAMPQ13449 338 aa9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 RCN1Q15293 331 aa9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 AHSA2Q719I0 299 aa9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 B9D2Q9BPU9 175 aa9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 ABHD14AQ9BUJ0 271 aa9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 TAF9BQ9HBM6 251 aa9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 OR2S2Q9NQN1 319 aa9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 PLCXD1Q9NUJ7 323 aa9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 PSORS1C1Q9UIG5 152 aa9.07□□□□□ -0.96
SQSTM1-203ENST00000422245 UBE2QL1A1L167 161 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 RGS11O94810 467 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 IGF1P05019 195 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 GNAO1P09471 354 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 VHLP40337 213 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 RAB25P57735 213 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 DGCR2P98153 550 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 CD69Q07108 199 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 KIR2DS1Q14954 304 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 MMDQ15546 238 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 NKAPLQ5M9Q1 402 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 SIGIRRQ6IA17 410 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 LAIR2Q6ISS4 152 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 OR5M8Q8NGP6 311 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 MRPL30Q8TCC3 161 aaKnown RBP9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 FBLIM1Q8WUP2 373 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 C4orf3Q8WVX3 66 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 FAM46BQ96A09 425 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 NEDD4LQ96PU5 975 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 HSPB9Q9BQS6 159 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 CHCHD6Q9BRQ6 235 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 DCLRE1BQ9H816 532 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 ZNF107Q9UII5 783 aaPredicted RBP9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 ERGIC3Q9Y282 383 aa9.06□□□□□ -0.96
SQSTM1-203ENST00000422245 RAMP3O60896 148 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 MYF6P23409 242 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 PSMB8P28062 276 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 PPP1CCP36873 323 aaKnown RBP9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 F2RL1P55085 397 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 HTD2P86397 168 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 GNMTQ14749 295 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 DEFB136Q30KP8 78 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 MORN2Q502X0 79 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 LY6G6FQ5SQ64 297 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 C6orf141Q5SZD1 244 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 C11orf87Q6NUJ2 197 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 MS4A15Q8N5U1 240 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 NANOGP1Q8N7R0 232 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 BPIFB6Q8NFQ5 453 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 PHYHIPQ92561 330 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 KCTD7Q96MP8 289 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 DUX3Q96PT4 197 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 MND1Q9BWT6 205 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 MRPL20Q9BYC9 149 aaKnown RBP9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 VCXQ9H320 206 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 FKBP14Q9NWM8 211 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 LRRC42Q9Y546 428 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 COL7A1Q02388 2944 aa9.05□□□□□ -0.96
SQSTM1-203ENST00000422245 YPEL1O60688 119 aa9.04□□□□□ -0.96
SQSTM1-203ENST00000422245 HLA-DRB1P01911 266 aa9.04□□□□□ -0.96
SQSTM1-203ENST00000422245 SLC2A2P11168 524 aaPredicted RBP9.04□□□□□ -0.96
SQSTM1-203ENST00000422245 CHATP28329 748 aa9.04□□□□□ -0.96
SQSTM1-203ENST00000422245 FHL3Q13643 280 aa9.04□□□□□ -0.96
SQSTM1-203ENST00000422245 HMGN3Q15651 99 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms