RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 NKX1-2Q9UD57 310 aaPredicted RBP10.94□□□□□ -0.66
NFE4-201ENST00000420058 ING4Q9UNL4 249 aa10.94□□□□□ -0.66
NFE4-201ENST00000420058 DHDHQ9UQ10 334 aa10.94□□□□□ -0.66
NFE4-201ENST00000420058 TMEM212A6NML5 194 aa10.93□□□□□ -0.66
NFE4-201ENST00000420058 HBZP02008 142 aa10.93□□□□□ -0.66
NFE4-201ENST00000420058 GABRB1P18505 474 aa10.93□□□□□ -0.66
NFE4-201ENST00000420058 ADARB1P78563 741 aaKnown RBP10.93□□□□□ -0.66
NFE4-201ENST00000420058 SRSF7Q16629 238 aaKnown RBP eCLIP10.93□□□□□ -0.66
NFE4-201ENST00000420058 C5orf64Q2M2E5 130 aa10.93□□□□□ -0.66
NFE4-201ENST00000420058 SYT6Q5T7P8 510 aaPredicted RBP10.93□□□□□ -0.66
NFE4-201ENST00000420058 NPBQ8NG41 125 aa10.93□□□□□ -0.66
NFE4-201ENST00000420058 OR6Q1Q8NGQ2 317 aa10.93□□□□□ -0.66
NFE4-201ENST00000420058 ISOC1Q96CN7 298 aa10.93□□□□□ -0.66
NFE4-201ENST00000420058 NABP2Q9BQ15 211 aa10.93□□□□□ -0.66
NFE4-201ENST00000420058 ALG8Q9BVK2 526 aa10.93□□□□□ -0.66
NFE4-201ENST00000420058 JAM3Q9BX67 310 aa10.93□□□□□ -0.66
NFE4-201ENST00000420058 FAM192AQ9GZU8 254 aa10.93□□□□□ -0.66
NFE4-201ENST00000420058 METTL9Q9H1A3 318 aa10.93□□□□□ -0.66
NFE4-201ENST00000420058 PARP11Q9NR21 331 aa10.93□□□□□ -0.66
NFE4-201ENST00000420058 PLA2G2EQ9NZK7 142 aa10.93□□□□□ -0.66
NFE4-201ENST00000420058 RCC2Q9P258 522 aaKnown RBP10.93□□□□□ -0.66
NFE4-201ENST00000420058 OAZ3Q9UMX2 235 aa10.93□□□□□ -0.66
NFE4-201ENST00000420058 AP4S1Q9Y587 144 aa10.93□□□□□ -0.66
NFE4-201ENST00000420058 KMT2AQ03164 3969 aa10.92□□□□□ -0.66
NFE4-201ENST00000420058 LGALS1P09382 135 aaKnown RBP10.92□□□□□ -0.66
NFE4-201ENST00000420058 RCC1P18754 421 aaPredicted RBP10.92□□□□□ -0.66
NFE4-201ENST00000420058 SOX2P48431 317 aa10.92□□□□□ -0.66
NFE4-201ENST00000420058 GTF2A1P52655 376 aaPredicted RBP10.92□□□□□ -0.66
NFE4-201ENST00000420058 CRIP2P52943 208 aaPredicted RBP10.92□□□□□ -0.66
NFE4-201ENST00000420058 MORN2Q502X0 79 aa10.92□□□□□ -0.66
NFE4-201ENST00000420058 ATAD3CQ5T2N8 411 aa10.92□□□□□ -0.66
NFE4-201ENST00000420058 OR4K15Q8NH41 348 aa10.92□□□□□ -0.66
NFE4-201ENST00000420058 KCTD12Q96CX2 325 aaKnown RBP10.92□□□□□ -0.66
NFE4-201ENST00000420058 ORAI1Q96D31 301 aa10.92□□□□□ -0.66
NFE4-201ENST00000420058 MRPL20Q9BYC9 149 aaKnown RBP10.92□□□□□ -0.66
NFE4-201ENST00000420058 GNG12Q9UBI6 72 aa10.92□□□□□ -0.66
NFE4-201ENST00000420058 NUBP2Q9Y5Y2 271 aa10.92□□□□□ -0.66
NFE4-201ENST00000420058 AIPO00170 330 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 FCN1O00602 326 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 MAGEB3O15480 346 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 NDUFA3O95167 84 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 IGLV1-51P01701 117 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 SNRPBP14678 240 aaKnown RBP10.91□□□□□ -0.66
NFE4-201ENST00000420058 GNMTQ14749 295 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 HAGHQ16775 308 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 MPV17LQ2QL34 196 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 MEDAGQ5VYS4 303 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 XAF1Q6GPH4 301 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 LIN54Q6MZP7 749 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 LINC00596Q86U02 117 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 LYPD6Q86Y78 171 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 TSEN15Q8WW01 171 aaKnown RBP10.91□□□□□ -0.66
NFE4-201ENST00000420058 RHOVQ96L33 236 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 GHITMQ9H3K2 345 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 ERVK13-1Q9NX77 482 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 DNAH10Q8IVF4 4471 aa10.91□□□□□ -0.66
NFE4-201ENST00000420058 NBR2O15453 112 aa10.9□□□□□ -0.66
NFE4-201ENST00000420058 RPSAP08865 295 aaKnown RBP10.9□□□□□ -0.66
NFE4-201ENST00000420058 OR8U9P0C7N5 309 aa10.9□□□□□ -0.66
NFE4-201ENST00000420058 SERPINA2P20848 420 aa10.9□□□□□ -0.66
NFE4-201ENST00000420058 CX3CL1P78423 397 aa10.9□□□□□ -0.66
NFE4-201ENST00000420058 OR52L2PQ8NGH6 319 aa10.9□□□□□ -0.66
NFE4-201ENST00000420058 CPNE2Q96FN4 548 aaPredicted RBP10.9□□□□□ -0.66
NFE4-201ENST00000420058 CENPNQ96H22 339 aaPredicted RBP10.9□□□□□ -0.66
NFE4-201ENST00000420058 ZNF251Q9BRH9 671 aa10.9□□□□□ -0.66
NFE4-201ENST00000420058 AMBNQ9NP70 447 aa10.9□□□□□ -0.66
NFE4-201ENST00000420058 TMEM138Q9NPI0 162 aa10.9□□□□□ -0.66
NFE4-201ENST00000420058 IMPAD1Q9NX62 359 aa10.9□□□□□ -0.66
NFE4-201ENST00000420058 CHCHD3Q9NX63 227 aaKnown RBP10.9□□□□□ -0.66
NFE4-201ENST00000420058 KIAA1456Q9P272 454 aa10.9□□□□□ -0.66
NFE4-201ENST00000420058 TRAPPC2LQ9UL33 140 aa10.9□□□□□ -0.66
NFE4-201ENST00000420058 A0A1W2PN81 502 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 SAC3D1A6NKF1 404 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 SPINT2O43291 252 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 HSPA12AO43301 675 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 IGHV3-11P01762 117 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 HSPB1P04792 205 aaKnown RBP10.89□□□□□ -0.67
NFE4-201ENST00000420058 ALPLP05186 524 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 ZNF93P35789 620 aaPredicted RBP10.89□□□□□ -0.67
NFE4-201ENST00000420058 CHRNA7P36544 502 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 OR3A3P47888 321 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 ECSCRQ19T08 205 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 LRRC36Q1X8D7 754 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 SLC22A6Q4U2R8 563 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 IL34Q6ZMJ4 242 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 ZNF833PQ6ZTB9 187 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 PRR18Q8N4B5 295 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 OR4C12Q96R67 309 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 THAP7Q9BT49 309 aaPredicted RBP10.89□□□□□ -0.67
NFE4-201ENST00000420058 TAF9BQ9HBM6 251 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 MBNL3Q9NUK0 354 aaKnown RBP10.89□□□□□ -0.67
NFE4-201ENST00000420058 GAB2Q9UQC2 676 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 FOXA2Q9Y261 457 aaPredicted RBP10.89□□□□□ -0.67
NFE4-201ENST00000420058 MRPS28Q9Y2Q9 187 aaKnown RBP10.89□□□□□ -0.67
NFE4-201ENST00000420058 GMPPBQ9Y5P6 360 aa10.89□□□□□ -0.67
NFE4-201ENST00000420058 SC5DO75845 299 aa10.88□□□□□ -0.67
NFE4-201ENST00000420058 CSTBP04080 98 aaKnown RBP10.88□□□□□ -0.67
NFE4-201ENST00000420058 LIMS3P0CW19 117 aa10.88□□□□□ -0.67
NFE4-201ENST00000420058 LIMS4P0CW20 117 aa10.88□□□□□ -0.67
NFE4-201ENST00000420058 GTF2F2P13984 249 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms