RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 PRKDCP78527 4128 aaKnown RBP16.42■□□□□ 0.22
PKNOX1-202ENST00000418336 DNAH3Q8TD57 4116 aa16.42■□□□□ 0.22
PKNOX1-202ENST00000418336 TRBV6-6A0A0A6YYG2 114 aa16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 SH2D7A6NKC9 451 aaPredicted RBP16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 ADARB2-AS1A8MUL3 147 aa16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 CCRL2O00421 344 aa16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 RAB11BQ15907 218 aa16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 C2orf76Q3KRA6 126 aa16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 MORN2Q502X0 79 aa16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 ZNF773Q6PK81 442 aa16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 ODF3L1Q8IXM7 274 aa16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 SVOPQ8N4V2 548 aa16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 Q8N6K4 173 aa16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 FAM3DQ96BQ1 224 aa16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 RBMXL1Q96E39 390 aaKnown RBP16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 NEDD4LQ96PU5 975 aa16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 Q9H521 79 aa16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 STEAP1Q9UHE8 339 aa16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 TET2Q6N021 2002 aaPredicted RBP16.41■□□□□ 0.22
PKNOX1-202ENST00000418336 IGHV1-3A0A0C4DH29 117 aa16.4■□□□□ 0.22
PKNOX1-202ENST00000418336 H3BUI4 141 aa16.4■□□□□ 0.22
PKNOX1-202ENST00000418336 BLVRBP30043 206 aaPredicted RBP16.4■□□□□ 0.22
PKNOX1-202ENST00000418336 MNDAP41218 407 aa16.4■□□□□ 0.22
PKNOX1-202ENST00000418336 HTD2P86397 168 aa16.4■□□□□ 0.22
PKNOX1-202ENST00000418336 PLAC9Q5JTB6 97 aa16.4■□□□□ 0.22
PKNOX1-202ENST00000418336 OR52L2PQ8NGH6 319 aa16.4■□□□□ 0.22
PKNOX1-202ENST00000418336 OR10V1Q8NGI7 309 aa16.4■□□□□ 0.22
PKNOX1-202ENST00000418336 OR10X1Q8NGY0 326 aa16.4■□□□□ 0.22
PKNOX1-202ENST00000418336 RTN4IP1Q8WWV3 396 aaPredicted RBP16.4■□□□□ 0.22
PKNOX1-202ENST00000418336 HDHD3Q9BSH5 251 aaPredicted RBP16.4■□□□□ 0.22
PKNOX1-202ENST00000418336 PLGRKTQ9HBL7 147 aa16.4■□□□□ 0.22
PKNOX1-202ENST00000418336 AK3Q9UIJ7 227 aa16.4■□□□□ 0.22
PKNOX1-202ENST00000418336 HSF4Q9ULV5 492 aa16.4■□□□□ 0.22
PKNOX1-202ENST00000418336 TMEM272A0A1B0GTI8 110 aa16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 M0QZ24 198 aa16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 SPINT2O43291 252 aa16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 VSIG10L2P0DP72 767 aa16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 CD28P10747 220 aa16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 FGF9P31371 208 aaPredicted RBP16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 REG1BP48304 166 aa16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 ARHGDIBP52566 201 aa16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 LY6G6FQ5SQ64 297 aa16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 HES5Q5TA89 166 aa16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 C22orf42Q6IC83 251 aa16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 IZUMO1Q8IYV9 350 aa16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 PRR18Q8N4B5 295 aa16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 C11orf44Q8N8P7 122 aa16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 DTX3Q8N9I9 347 aa16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 CAPSLQ8WWF8 208 aa16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 KCNK7Q9Y2U2 307 aa16.39■□□□□ 0.21
PKNOX1-202ENST00000418336 IFITM5A6NNB3 132 aa16.38■□□□□ 0.21
PKNOX1-202ENST00000418336 FAM106CPP0CH98 169 aa16.38■□□□□ 0.21
PKNOX1-202ENST00000418336 ABCA11PQ4W5N1 156 aa16.38■□□□□ 0.21
PKNOX1-202ENST00000418336 C5orf56Q8N8D9 126 aa16.38■□□□□ 0.21
PKNOX1-202ENST00000418336 FCGR1BQ92637 280 aa16.38■□□□□ 0.21
PKNOX1-202ENST00000418336 MMP27Q9H306 513 aa16.38■□□□□ 0.21
PKNOX1-202ENST00000418336 TXNL4BQ9NX01 149 aaKnown RBP16.38■□□□□ 0.21
PKNOX1-202ENST00000418336 JPT1Q9UK76 154 aa16.38■□□□□ 0.21
PKNOX1-202ENST00000418336 ZNF736B4DX44 427 aaPredicted RBP16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 YPEL1O60688 119 aa16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 IGKV1D-33P01593 117 aa16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 IGKV1-33P01594 117 aa16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 GAPDHP04406 335 aaKnown RBP16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 PSMB9P28065 219 aa16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 PPP1CCP36873 323 aaKnown RBP16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 MOGAT2Q3SYC2 334 aa16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 KCTD21Q4G0X4 260 aa16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 TCTEX1D4Q5JR98 221 aa16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 STEAP3Q658P3 488 aa16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 Q6ZTK2 550 aa16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 ARHGAP5-AS1Q96IT6 56 aa16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 YPEL2Q96QA6 119 aa16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 PECRQ9BY49 303 aa16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 PLSCR3Q9NRY6 295 aa16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 GNG12Q9UBI6 72 aa16.37■□□□□ 0.21
PKNOX1-202ENST00000418336 A0A0B4J203 849 aa16.36■□□□□ 0.21
PKNOX1-202ENST00000418336 LPLP06858 475 aa16.36■□□□□ 0.21
PKNOX1-202ENST00000418336 VDAC2P45880 294 aaPredicted RBP16.36■□□□□ 0.21
PKNOX1-202ENST00000418336 VEGFCP49767 419 aa16.36■□□□□ 0.21
PKNOX1-202ENST00000418336 PSMD7P51665 324 aa16.36■□□□□ 0.21
PKNOX1-202ENST00000418336 EAF1Q96JC9 268 aaPredicted RBP16.36■□□□□ 0.21
PKNOX1-202ENST00000418336 URM1Q9BTM9 101 aaKnown RBP16.36■□□□□ 0.21
PKNOX1-202ENST00000418336 OR2S2Q9NQN1 319 aa16.36■□□□□ 0.21
PKNOX1-202ENST00000418336 PLEKHJ1Q9NW61 149 aa16.36■□□□□ 0.21
PKNOX1-202ENST00000418336 MOB4Q9Y3A3 225 aa16.36■□□□□ 0.21
PKNOX1-202ENST00000418336 NOTCH1P46531 2555 aa16.35■□□□□ 0.21
PKNOX1-202ENST00000418336 IGHV3-72A0A0B4J1Y9 119 aa16.35■□□□□ 0.21
PKNOX1-202ENST00000418336 RAB3BP20337 219 aa16.35■□□□□ 0.21
PKNOX1-202ENST00000418336 C10orf99Q6UWK7 81 aa16.35■□□□□ 0.21
PKNOX1-202ENST00000418336 AKR1E2Q96JD6 320 aa16.35■□□□□ 0.21
PKNOX1-202ENST00000418336 PARP12Q9H0J9 701 aaKnown RBP16.35■□□□□ 0.21
PKNOX1-202ENST00000418336 OR51E2Q9H255 320 aa16.35■□□□□ 0.21
PKNOX1-202ENST00000418336 IFI27L2Q9H2X8 130 aa16.35■□□□□ 0.21
PKNOX1-202ENST00000418336 Q9N2K0 584 aa16.35■□□□□ 0.21
PKNOX1-202ENST00000418336 RAB9BQ9NP90 201 aa16.35■□□□□ 0.21
PKNOX1-202ENST00000418336 KCNIP1Q9NZI2 227 aa16.35■□□□□ 0.21
PKNOX1-202ENST00000418336 STUB1Q9UNE7 303 aa16.35■□□□□ 0.21
PKNOX1-202ENST00000418336 IGKV1-6A0A0C4DH72 117 aa16.34■□□□□ 0.21
PKNOX1-202ENST00000418336 RAB27BO00194 218 aa16.34■□□□□ 0.21
PKNOX1-202ENST00000418336 PDCD5O14737 125 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms