RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 HAPLN4Q86UW8 402 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 ALKBH7Q9BT30 221 aaPredicted RBP6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 PATZ1Q9HBE1 687 aaKnown RBP6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 RYDENQ9NUL5 291 aaKnown RBP6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 ELOVL5Q9NYP7 299 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 LAMTOR2Q9Y2Q5 125 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 WDR87Q6ZQQ6 2873 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 KIR2DS5A0A0G2JLQ3 304 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 A0A0G2JNG1 304 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 H0Y980 276 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 KIR2DS3K7RE56 304 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 PPBPP02775 128 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 CLDN17P56750 224 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 HBG1P69891 147 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 HBG2P69892 147 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 KIR2DS5Q14953 304 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 HIST3H3Q16695 136 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 LINC01551Q86U37 167 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 OSR2Q8N2R0 312 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 NEIL1Q96FI4 390 aaPredicted RBP6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 ZPBPQ9BS86 351 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 ZNF552Q9H707 407 aaPredicted RBP6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 UQCR10Q9UDW1 63 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 ARHGAP21Q5T5U3 1957 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 VSTM2BA6NLU5 285 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 AQP7O14520 342 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 SERF1AO75920 110 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 OPN1LWP04000 364 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 MALLQ13021 153 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 MSMO1Q15800 293 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 RNF2Q99496 336 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 NCOR1P1Q9H4R4 102 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 ST3GAL6Q9Y274 331 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 IGKV1-12A0A0C4DH73 117 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 MMP23AO75900 390 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 IGKV1D-12P01611 117 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 OTX1P32242 354 aaPredicted RBP6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 LHX2P50458 406 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 SHBQ15464 509 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 RSPO1Q2MKA7 263 aaPredicted RBP6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 TCF23Q7RTU1 214 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 ZNF709Q8N972 641 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 TAF15Q92804 592 aaKnown RBP eCLIP6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 GPR146Q96CH1 333 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 ZDHHC11Q9H8X9 412 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 TIMM9Q9Y5J7 89 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 EXPH5Q8NEV8 1989 aa6.86□□□□□ -1.31
HMGXB4-202ENST00000418170 CTXND1A0A1B0GTU2 59 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 C2orf72A6NCS6 295 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 POU2F2P09086 479 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 MPLP40238 635 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 OR8G2PQ6IF36 304 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 TIPARPQ7Z3E1 657 aaKnown RBP6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 C1orf174Q8IYL3 243 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 ZNF441Q8N8Z8 693 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 Q8N976 141 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 OR2D3Q8NGH3 330 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 GATAD1Q8WUU5 269 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 FAM122AQ96E09 287 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 OR4C12Q96R67 309 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 RBM24Q9BX46 236 aaKnown RBP6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 COX11Q9Y6N1 276 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 IGKV1D-13A0A0B4J2D9 117 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 SLC22A20A6NK97 555 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 TMPRSS2O15393 492 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 IGKV1-13P0DP09 117 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 HHEXQ03014 270 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 RUNX3Q13761 415 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 MORN2Q502X0 79 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 TMEM240Q5SV17 173 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 Q6ZS49 121 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 GJC3Q8NFK1 279 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 OR5T1Q8NG75 326 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 SGMS2Q8NHU3 365 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 SLC25A22Q9H936 323 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 PSENENQ9NZ42 101 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 SEC16AO15027 2179 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 C1QTNF9BB2RNN3 333 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 HMGB3O15347 200 aaKnown RBP6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 SYNGR2O43760 224 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 EFNA2O43921 213 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 CRISP2P16562 243 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 NPPCP23582 126 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 C17orf67Q0P5P2 114 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 CNN3Q15417 329 aaKnown RBP6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 SPATA45Q537H7 98 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 ZNF738Q8NE65 137 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 ZNF442Q9H7R0 627 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 ZNF703Q9H7S9 590 aaPredicted RBP6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 IL36GQ9NZH8 169 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 COPS7AQ9UBW8 275 aa6.85□□□□□ -1.31
HMGXB4-202ENST00000418170 SHISA8B8ZZ34 492 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 C5orf67F2Z3F1 127 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 F6UZH7 168 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 HYPMO75409 117 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 IGLC2P0DOY2 106 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 IGLC3P0DOY3 106 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 DRD1P21728 446 aa6.84□□□□□ -1.31
HMGXB4-202ENST00000418170 EFNA3P52797 238 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms