RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 TMEM56Q96MV1 263 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 ARRDC1-AS1Q9H2J1 176 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 ZNF665Q9H7R5 613 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 DCAF16Q9NXF7 216 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 TINAGQ9UJW2 476 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 PLXNB2O15031 1838 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 RPEL1Q2QD12 228 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 CPEB3Q8NE35 698 aaKnown RBP11.24□□□□□ -0.61
SCN1B-202ENST00000415950 MRPL30Q8TCC3 161 aaKnown RBP11.24□□□□□ -0.61
SCN1B-202ENST00000415950 DTD1Q8TEA8 209 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 DPF1Q92782 380 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 AAMDCQ9H7C9 122 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 VAX2Q9UIW0 290 aa11.24□□□□□ -0.61
SCN1B-202ENST00000415950 SNURFLB1AK76 121 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 TGFBR3LH3BV60 316 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 SPEM1Q8N4L4 309 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 OR52M1Q8NGK5 317 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 CFHR5Q9BXR6 569 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 SMOC1Q9H4F8 434 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 STARD10Q9Y365 291 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 RRP8O43159 456 aaKnown RBP11.23□□□□□ -0.61
SCN1B-202ENST00000415950 CEBPEQ15744 281 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 SPINK14Q6IE38 97 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 Q8IYB0 196 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 OR5AU1Q8NGC0 362 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 OR6X1Q8NH79 312 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 CTHRC1Q96CG8 243 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 RASL10BQ96S79 203 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 KLHDC3Q9BQ90 382 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 NAGKQ9UJ70 344 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 COL6A6A6NMZ7 2263 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 MGAMO43451 1857 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 TGIF2-C20orf24A0A0A6YYL0 155 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 F5H697 171 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 PGA4P0DJD7 388 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 PGA5P0DJD9 388 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 HKR1P10072 659 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 RPS4Y1P22090 263 aaKnown RBP11.23□□□□□ -0.61
SCN1B-202ENST00000415950 RPL13AP40429 203 aaKnown RBP11.23□□□□□ -0.61
SCN1B-202ENST00000415950 UNC119Q13432 240 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 OR2D3Q8NGH3 330 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 TBX15Q96SF7 602 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 RNF2Q99496 336 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 YBX2Q9Y2T7 364 aaKnown RBP11.23□□□□□ -0.61
SCN1B-202ENST00000415950 LRRC3CA6NJW4 275 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 NDUFB3O43676 98 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 TCF21O43680 179 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 SURF2Q15527 256 aaPredicted RBP11.23□□□□□ -0.61
SCN1B-202ENST00000415950 Q56UQ5 140 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 STPG1Q5TH74 334 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 SLC22A18ASQ8N1D0 253 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 ABHD3Q8WU67 409 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 WDR61Q9GZS3 305 aaKnown RBP11.23□□□□□ -0.61
SCN1B-202ENST00000415950 SH2D2AQ9NP31 389 aa11.23□□□□□ -0.61
SCN1B-202ENST00000415950 HEATR5AQ86XA9 2040 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 DOCK11Q5JSL3 2073 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 ELOA3CA0A087WX78 387 aaPredicted RBP11.22□□□□□ -0.61
SCN1B-202ENST00000415950 DXOO77932 396 aaKnown RBP11.22□□□□□ -0.61
SCN1B-202ENST00000415950 ZNF137PP52743 207 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 NAAAQ02083 359 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 SLC35E3Q7Z769 313 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 FLYWCH2Q96CP2 140 aaKnown RBP11.22□□□□□ -0.61
SCN1B-202ENST00000415950 SLX1AQ9BQ83 275 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 A0A1B0GV90 55 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 CELA2AP08217 269 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 LYZP61626 148 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 ELOBQ15370 118 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 SGMS2Q8NHU3 365 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 GSX1Q9H4S2 264 aaPredicted RBP11.22□□□□□ -0.61
SCN1B-202ENST00000415950 GSN-AS1Q9NRJ2 163 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 NPTNQ9Y639 398 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 CASP8AP2Q9UKL3 1982 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 SMIM17P0DL12 118 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 RPL7P18124 248 aaKnown RBP11.22□□□□□ -0.61
SCN1B-202ENST00000415950 R3HDM4Q96D70 268 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 WDR90Q96KV7 1748 aa11.22□□□□□ -0.61
SCN1B-202ENST00000415950 TMSB15BA0A087X1C1 80 aa11.21□□□□□ -0.61
SCN1B-202ENST00000415950 RAB29O14966 203 aa11.21□□□□□ -0.61
SCN1B-202ENST00000415950 MUC15Q8N387 334 aa11.21□□□□□ -0.61
SCN1B-202ENST00000415950 TPRX1Q8N7U7 411 aa11.21□□□□□ -0.61
SCN1B-202ENST00000415950 ZNF721Q8TF20 911 aa11.21□□□□□ -0.61
SCN1B-202ENST00000415950 IGKV3-7A0A075B6H7 116 aa11.21□□□□□ -0.61
SCN1B-202ENST00000415950 TRDCB7Z8K6 153 aa11.21□□□□□ -0.61
SCN1B-202ENST00000415950 H0YIZ8 118 aa11.21□□□□□ -0.61
SCN1B-202ENST00000415950 SMIM10L1P0DMW3 83 aa11.21□□□□□ -0.61
SCN1B-202ENST00000415950 ZNF708P17019 499 aa11.21□□□□□ -0.61
SCN1B-202ENST00000415950 BCL3P20749 454 aa11.21□□□□□ -0.61
SCN1B-202ENST00000415950 TMEM252Q8N6L7 170 aa11.21□□□□□ -0.61
SCN1B-202ENST00000415950 OR4F17Q8NGA8 305 aa11.21□□□□□ -0.61
SCN1B-202ENST00000415950 SMIM10Q96HG1 83 aa11.21□□□□□ -0.61
SCN1B-202ENST00000415950 J3KRW8 73 aa11.21□□□□□ -0.62
SCN1B-202ENST00000415950 CIDEAO60543 219 aa11.21□□□□□ -0.62
SCN1B-202ENST00000415950 RAMP1O60894 148 aa11.21□□□□□ -0.62
SCN1B-202ENST00000415950 CD74P04233 296 aa11.21□□□□□ -0.62
SCN1B-202ENST00000415950 CYC1P08574 325 aa11.21□□□□□ -0.62
SCN1B-202ENST00000415950 SEC11BP0C7V7 166 aa11.21□□□□□ -0.62
SCN1B-202ENST00000415950 PPOXP50336 477 aa11.21□□□□□ -0.62
SCN1B-202ENST00000415950 SUCLG1P53597 346 aaKnown RBP11.21□□□□□ -0.62
SCN1B-202ENST00000415950 MRPS11P82912 194 aaKnown RBP11.21□□□□□ -0.62
SCN1B-202ENST00000415950 ROM1Q03395 351 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms