RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 SSX5O60225 188 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 RGS11O94810 467 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 HLA-DQB1P01920 261 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 COX7A1P24310 79 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 DYNLT3P51808 116 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 PRRX1P54821 245 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 FOXB2Q5VYV0 432 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 SLC25A48Q6ZT89 311 aaKnown RBP9.67□□□□□ -0.86
ATG4B-207ENST00000415107 OR1L1Q8NH94 360 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 RFESDQ8TAC1 157 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 ZFAND2BQ8WV99 257 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 ZNF48Q96MX3 618 aaPredicted RBP9.67□□□□□ -0.86
ATG4B-207ENST00000415107 SLC6A7Q99884 636 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 MIXL1Q9H2W2 232 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 MMP27Q9H306 513 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 GHITMQ9H3K2 345 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 OR2S2Q9NQN1 319 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 PSG11Q9UQ72 335 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 AMMECR1Q9Y4X0 333 aaPredicted RBP9.67□□□□□ -0.86
ATG4B-207ENST00000415107 POMT1Q9Y6A1 747 aa9.67□□□□□ -0.86
ATG4B-207ENST00000415107 IGHV3OR16-10A0A075B7F0 116 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 A0A0U1RQK1 487 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 LY6LH3BQJ8 138 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 BUB1B-PAK6H3BSN5 160 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 ARG1P05089 322 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 CTXN2P0C2S0 81 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 NAT1P18440 290 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 HTR1DP28221 377 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 TALDO1P37837 337 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 CEACAM3P40198 252 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 LGALS4P56470 323 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 MRPS10P82664 201 aaKnown RBP9.66□□□□□ -0.86
ATG4B-207ENST00000415107 HERPUD1Q15011 391 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 DEFB112Q30KQ8 113 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 MORN2Q502X0 79 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 LDLRAD2Q5SZI1 272 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 FAM71F2Q6NXP2 309 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 Q6YL49 198 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 LAX1Q8IWV1 398 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 BCL6BQ8N143 479 aaPredicted RBP9.66□□□□□ -0.86
ATG4B-207ENST00000415107 GPX8Q8TED1 209 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 NUDCD2Q8WVJ2 157 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 BATF3Q9NR55 127 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 DPM3Q9P2X0 92 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 GNG12Q9UBI6 72 aa9.66□□□□□ -0.86
ATG4B-207ENST00000415107 ELF5Q9UKW6 265 aaPredicted RBP9.66□□□□□ -0.86
ATG4B-207ENST00000415107 TRBV6-7A0A0A0MS04 114 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 IGKV1-6A0A0C4DH72 117 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 LEUTXA8MZ59 168 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 CTDSP2O14595 271 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 TOR1AO14656 332 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 TCF21O43680 179 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 LPLP06858 475 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 SCTP09683 121 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 ZBTB25P24278 435 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 NFYBP25208 207 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 RPL15P61313 204 aaKnown RBP9.65□□□□□ -0.86
ATG4B-207ENST00000415107 HABP2Q14520 560 aaPredicted RBP9.65□□□□□ -0.86
ATG4B-207ENST00000415107 UTF1Q5T230 341 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 CNIH2Q6PI25 160 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 LINC00299Q6ZSB3 139 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 HOGA1Q86XE5 327 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 PDZD9Q8IXQ8 264 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 MCFD2Q8NI22 146 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 SSMEM1Q8WWF3 244 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 EDARADDQ8WWZ3 215 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 ST6GALNAC6Q969X2 333 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 EXTL2Q9UBQ6 330 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 ANXA10Q9UJ72 324 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 FAM96BQ9Y3D0 163 aa9.65□□□□□ -0.86
ATG4B-207ENST00000415107 C2CD3Q4AC94 2353 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 FAM25AB3EWG3 89 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 FAM25CB3EWG5 89 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 FAM25GB3EWG6 89 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 CTDSPLO15194 276 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 RGS5O15539 181 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 TXNL1O43396 289 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 PRSS3P35030 304 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 IER3P46695 156 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 RAB7AP51149 207 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 PRB3Q04118 309 aaPredicted RBP9.64□□□□□ -0.87
ATG4B-207ENST00000415107 SSBP1Q04837 148 aaKnown RBP9.64□□□□□ -0.87
ATG4B-207ENST00000415107 ZNF816Q0VGE8 651 aaPredicted RBP9.64□□□□□ -0.87
ATG4B-207ENST00000415107 MADCAM1Q13477 382 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 KRTAP21-3Q3LHN1 58 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 CCDC144NLQ6NUI1 221 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 RBMS3Q6XE24 437 aaKnown RBP9.64□□□□□ -0.87
ATG4B-207ENST00000415107 OR8H3Q8N146 312 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 PRR18Q8N4B5 295 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 SIGLECL1Q8N7X8 197 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 OR5R1Q8NH85 324 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 SETD6Q8TBK2 473 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 C22orf15Q8WYQ4 148 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 SOSTQ9BQB4 213 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 AGMATQ9BSE5 352 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 DCUN1D5Q9BTE7 237 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 ABHD14AQ9BUJ0 271 aa9.64□□□□□ -0.87
ATG4B-207ENST00000415107 C6orf62Q9GZU0 229 aaPredicted RBP9.64□□□□□ -0.87
ATG4B-207ENST00000415107 ZNF230Q9UIE0 474 aaPredicted RBP9.64□□□□□ -0.87
ATG4B-207ENST00000415107 JMJD1CQ15652 2540 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms