RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 Q3ZCU0 254 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 OR52L2PQ8NGH6 319 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 UBALD1Q8TB05 177 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 YPEL2Q96QA6 119 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 SLC25A21Q9BQT8 299 aaPredicted RBP11.7□□□□□ -0.54
SF3B1-204ENST00000414963 GINS4Q9BRT9 223 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 UNKLQ9H9P5 680 aaKnown RBP11.7□□□□□ -0.54
SF3B1-204ENST00000414963 OR2S2Q9NQN1 319 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 OR1A1Q9P1Q5 309 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 SLC23A1Q9UHI7 598 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 KPTNQ9Y664 436 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 DSCAML1Q8TD84 2053 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 CCDC168Q8NDH2 2452 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 BAHCC1Q9P281 2608 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 HSPA12AO43301 675 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 MMP23AO75900 390 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 MSMBP08118 114 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 IGHV1-8P0DP01 117 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 CEACAM6P40199 344 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 MORN2Q502X0 79 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 PRAMEF5Q5TYX0 476 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 AADACL3Q5VUY0 350 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 IDO2Q6ZQW0 420 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 NRARPQ7Z6K4 114 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 Q8N7P7 452 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 C8orf31Q8N9H6 132 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 WFDC11Q8NEX6 87 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 OR13C8Q8NGS7 320 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 MRGPRFQ96AM1 343 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 ZNF2Q9BSG1 426 aaPredicted RBP11.69□□□□□ -0.54
SF3B1-204ENST00000414963 MMP26Q9NRE1 261 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 RDH8Q9NYR8 311 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 COPZ2Q9P299 210 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 ZNF69Q9UC07 566 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 OR2W1Q9Y3N9 320 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 INSIG2Q9Y5U4 225 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 SESN1Q9Y6P5 492 aa11.69□□□□□ -0.54
SF3B1-204ENST00000414963 PRRC2AP48634 2157 aaKnown RBP11.68□□□□□ -0.54
SF3B1-204ENST00000414963 TRAV20A0A0B4J274 112 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 FAM240BA0A1B0GVZ2 78 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 RGS11O94810 467 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 NDUFB6O95139 128 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 PPYP01298 95 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 AADACP22760 399 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 NFYAP23511 347 aaPredicted RBP11.68□□□□□ -0.54
SF3B1-204ENST00000414963 OMGP23515 440 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 PRTN3P24158 256 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 CD34P28906 385 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 ECI1P42126 302 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 CCR6P51684 374 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 UCP3P55916 312 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 PAX8Q06710 450 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 GNMTQ14749 295 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 SURF2Q15527 256 aaPredicted RBP11.68□□□□□ -0.54
SF3B1-204ENST00000414963 BTNL3Q6UXE8 466 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 LINC01356Q8N9X3 169 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 CHPT1Q8WUD6 406 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 MOB3AQ96BX8 217 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 DPAGT1Q9H3H5 408 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 OCEL1Q9H607 264 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 METTL8Q9H825 291 aaKnown RBP11.68□□□□□ -0.54
SF3B1-204ENST00000414963 GNG12Q9UBI6 72 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 NOTCH2Q04721 2471 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 KIAA2026Q5HYC2 2103 aa11.68□□□□□ -0.54
SF3B1-204ENST00000414963 DOCK11Q5JSL3 2073 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 OR5H14A6NHG9 310 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 TCRBP04435 133 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 GATA3P23771 443 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 PPP1CCP36873 323 aaKnown RBP11.67□□□□□ -0.54
SF3B1-204ENST00000414963 DVL1P1P54792 670 aaPredicted RBP11.67□□□□□ -0.54
SF3B1-204ENST00000414963 ERVFRD-1P60508 538 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 ARF6P62330 175 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 OXA1LQ15070 435 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 RBMS2Q15434 407 aaKnown RBP11.67□□□□□ -0.54
SF3B1-204ENST00000414963 SCGB2B2Q4G0G5 96 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 FAM53AQ6NSI3 398 aaPredicted RBP11.67□□□□□ -0.54
SF3B1-204ENST00000414963 MINDY2Q8NBR6 621 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 ZNF439Q8NDP4 499 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 ZNF596Q8TC21 504 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 ENKURQ8TC29 256 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 EDARADDQ8WWZ3 215 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 TMPRSS13Q9BYE2 586 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 SIRPDQ9H106 197 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 TMEM133Q9H2Q1 129 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 ONECUT1Q9UBC0 465 aa11.67□□□□□ -0.54
SF3B1-204ENST00000414963 IGHV3-43A0A0B4J1X8 118 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 FAM172BPA6NC97 362 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 IGHV3-43DP0DP04 118 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 MMP9P14780 707 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 NFYBP25208 207 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 GZMKP49863 264 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 LUMP51884 338 aaPredicted RBP11.66□□□□□ -0.54
SF3B1-204ENST00000414963 HERV-K104P61576 105 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 MSMO1Q15800 293 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 LTC4SQ16873 150 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 TMEM249Q2WGJ8 235 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 LPCAT3Q6P1A2 487 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 LINC00311Q8N616 119 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 ZDHHC22Q8N966 263 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 OR10V1Q8NGI7 309 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms