RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 SLC25A6P12236 298 aa12.71□□□□□ -0.38
TTC39A-208ENST00000413473 ZNF343Q6P1L6 599 aa12.71□□□□□ -0.38
TTC39A-208ENST00000413473 Q6P435 159 aa12.71□□□□□ -0.38
TTC39A-208ENST00000413473 C1QL4Q86Z23 238 aa12.71□□□□□ -0.38
TTC39A-208ENST00000413473 TCTEX1D2Q8WW35 142 aa12.71□□□□□ -0.38
TTC39A-208ENST00000413473 ZNF251Q9BRH9 671 aa12.71□□□□□ -0.38
TTC39A-208ENST00000413473 RSG1Q9BU20 258 aa12.71□□□□□ -0.38
TTC39A-208ENST00000413473 ABI3Q9P2A4 366 aa12.71□□□□□ -0.38
TTC39A-208ENST00000413473 GTF3C1Q12789 2109 aa12.71□□□□□ -0.38
TTC39A-208ENST00000413473 KMT2EQ8IZD2 1858 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 IL18BPO95998 194 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 IAPPP10997 89 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 DCAF10Q5QP82 559 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 NCMAPQ5T1S8 102 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 TVP23CQ96ET8 276 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 NIPSNAP3BQ9BS92 247 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 PKIBQ9C010 78 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 RBM7Q9Y580 266 aaKnown RBP12.7□□□□□ -0.38
TTC39A-208ENST00000413473 URGCP-MRPS24S4R325 110 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 SIRPB1O00241 398 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 SYNGR2O43760 224 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 CLN5O75503 358 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 MT-CO3P00414 261 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 ZNF16P17020 682 aaPredicted RBP12.7□□□□□ -0.38
TTC39A-208ENST00000413473 TESK1Q15569 626 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 DPPA3Q6W0C5 159 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 TCEAL7Q9BRU2 100 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 DDA1Q9BW61 102 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 HIPK2Q9H2X6 1198 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 RPRMQ9NS64 109 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 USF3Q68DE3 2245 aa12.7□□□□□ -0.38
TTC39A-208ENST00000413473 A0A1W2PNU3 283 aaPredicted RBP12.69□□□□□ -0.38
TTC39A-208ENST00000413473 C19orf67A6NJJ6 358 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 J3QT63 122 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 FABP1P07148 127 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 METTL15P1P0C7V9 234 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 EIF2S3P41091 472 aaKnown RBP12.69□□□□□ -0.38
TTC39A-208ENST00000413473 KHDC3LQ587J8 217 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 MDP1Q86V88 176 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 BCL2L14Q9BZR8 327 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 GSN-AS1Q9NRJ2 163 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 GNG13Q9P2W3 67 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 A0A087WWC5 75 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 A0A1W2PR80 420 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 LINC00587B1AMM8 73 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.69□□□□□ -0.38
TTC39A-208ENST00000413473 IGKV1-5P01602 117 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 ARL16Q0P5N6 197 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 KIAA0141Q14154 515 aaPredicted RBP12.69□□□□□ -0.38
TTC39A-208ENST00000413473 ELOBQ15370 118 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 SCGB1C1Q8TD33 95 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 Q8WTZ3 238 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 LSM10Q969L4 123 aaKnown RBP12.69□□□□□ -0.38
TTC39A-208ENST00000413473 VSIRQ9H7M9 311 aa12.69□□□□□ -0.38
TTC39A-208ENST00000413473 IGHV3-64DA0A0J9YX35 117 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 CXCL1P09341 107 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 OR1K1Q8NGR3 316 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 PSENENQ9NZ42 101 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 TRAPPC2LQ9UL33 140 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 TRAV1-1A0A0B4J248 108 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 PIGBOS1A0A0B4J2F0 54 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 LOC102723971A0A1B0GUV8 181 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 WDR1O75083 606 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 OR2H2O95918 312 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 MEOX1P50221 254 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 ERVFRD-1P60508 538 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 ZNF585BQ52M93 769 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 LCN15Q6UWW0 184 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 DBX2Q6ZNG2 339 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 BCL2L2Q92843 193 aaPredicted RBP12.68□□□□□ -0.38
TTC39A-208ENST00000413473 GPR87Q9BY21 358 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 KCNS2Q9ULS6 477 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 NPIPB11E5RHQ5 1161 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 WDR86Q86TI4 376 aa12.68□□□□□ -0.38
TTC39A-208ENST00000413473 TECTAO75443 2155 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 ZFP92A6NM28 416 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 PPIHO43447 177 aaKnown RBP12.67□□□□□ -0.38
TTC39A-208ENST00000413473 YIF1AO95070 293 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 SP1P08047 785 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 WNT2P09544 360 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 RAB11AP62491 216 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 ZNF497Q6ZNH5 498 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 SLC35E3Q7Z769 313 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 HAPLN4Q86UW8 402 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 ZNF525Q8N782 197 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 SCCPDHQ8NBX0 429 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 DEFB127Q9H1M4 99 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 ZNF665Q9H7R5 613 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 GP6Q9HCN6 339 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 DOCK11Q5JSL3 2073 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 LRP5LA4QPB2 252 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 CEACAM6P40199 344 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 ZNF674Q2M3X9 581 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 FBXW9Q5XUX1 488 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 RTL8AQ9BWD3 113 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 IL17BQ9UHF5 180 aa12.67□□□□□ -0.38
TTC39A-208ENST00000413473 CHD3Q12873 2000 aaKnown RBP12.66□□□□□ -0.38
TTC39A-208ENST00000413473 TGIF2-C20orf24A0A0A6YYL0 155 aa12.66□□□□□ -0.38
TTC39A-208ENST00000413473 MDH2P40926 338 aaKnown RBP12.66□□□□□ -0.38
TTC39A-208ENST00000413473 GLIPR1P48060 266 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms