RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 LRRC75AQ8NAA5 344 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 SLC17A2O00624 439 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 BCL2L11O43521 198 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 MAS1LP35410 378 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 RPL29P47914 159 aaKnown RBP9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 MUC20Q8N307 709 aaPredicted RBP9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 OR4C13Q8NGP0 309 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 RASL10BQ96S79 203 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 HPXP02790 462 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 FAM157CP0CG43 387 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 JUNBP17275 347 aaPredicted RBP9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 NXPH1P58417 271 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 OR2V2Q96R30 315 aa9.86□□□□□ -0.83
PRPF40A-202ENST00000410080 LOC107984156A0A0G2JMH3 177 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 REG1AP05451 166 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 PRR35P0CG20 571 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 PDLIM4P50479 330 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 ELOBQ15370 118 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 ARL17AQ8IVW1 177 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 TSPAN32Q96QS1 320 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 CTSVO60911 334 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 APCSP02743 223 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 TOMM34Q15785 309 aaPredicted RBP9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 NKG7Q16617 165 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 GUK1Q16774 197 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 GVQW1Q8N7I0 195 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 ADAT3Q96EY9 351 aaPredicted RBP9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 NEU1Q99519 415 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 CIRBPQ14011 172 aaKnown RBP9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 ZNF343Q6P1L6 599 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 SSX8Q7RTT4 187 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 OR2Y1Q8NGV0 311 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 CCL13Q99616 98 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 SLC25A19Q9HC21 320 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 YAE1D1Q9NRH1 226 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 TRAV20A0A0B4J274 112 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 CORTO00230 105 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 RAE1P78406 368 aaKnown RBP9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 MRPL54Q6P161 138 aaKnown RBP9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 MRGPRFQ96AM1 343 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 MMP26Q9NRE1 261 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 CCL3P10147 92 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 LIFP15018 202 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 ACVR1Q04771 509 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 WDR73Q6P4I2 378 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 OR2W3Q7Z3T1 314 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 LDLRAD3Q86YD5 345 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 DYRK2Q92630 601 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 TMEM56-RWDD3S4R434 201 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 hCG_38984A0A1B0GV85 526 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 C9orf170A2RU37 121 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 ATP5G2Q06055 141 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 LINC00303Q3SY05 128 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 BVESQ8NE79 360 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 OR1L8Q8NGR8 309 aa9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 GMPPAQ96IJ6 420 aaPredicted RBP9.85□□□□□ -0.83
PRPF40A-202ENST00000410080 J3QR06 171 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 SUCLG1P53597 346 aaKnown RBP9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 DCAF12L2Q5VW00 463 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 HCP5Q6MZN7 132 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 NAT8Q9UHE5 227 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 PDCD6O75340 191 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 CLDN14O95500 239 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 RPS4Y2Q8TD47 263 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 CDCA4Q9BXL8 241 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 GEMIN7Q9H840 131 aaKnown RBP9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 STARD10Q9Y365 291 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 GPX5O75715 221 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 PTBP1P26599 531 aaKnown RBP eCLIP9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 SNRPD3P62318 126 aaKnown RBP9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 DEFB121Q5J5C9 76 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 ATG101Q9BSB4 218 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 RNF122Q9H9V4 155 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 PNLIPP16233 465 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 HIST3H3Q16695 136 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 BAP18Q8IXM2 172 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 MARVELD3Q96A59 401 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 NTNG2Q96CW9 530 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 KLK15Q9H2R5 256 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 GREB1LQ9C091 1923 aaPredicted RBP9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 TRAV1-2A0A0B4J238 106 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 PTHLHP12272 177 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 DAOP14920 347 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 UNQ5815/PRO19632Q6UWF5 114 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 UCN2Q96RP3 112 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 VGLL1Q99990 258 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 RALYQ9UKM9 306 aaKnown RBP9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 RAB29O14966 203 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 HIST1H1BP16401 226 aaKnown RBP9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 MALP21145 153 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 GZMKP49863 264 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 GP2P55259 537 aaKnown RBP9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 COTL1Q14019 142 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 COL5A1-AS1Q5SY13 56 aa9.84□□□□□ -0.83
PRPF40A-202ENST00000410080 IGHV3-66A0A0C4DH42 116 aa9.83□□□□□ -0.84
PRPF40A-202ENST00000410080 A0A1B0GUH1 482 aa9.83□□□□□ -0.84
PRPF40A-202ENST00000410080 SYNGR1O43759 233 aa9.83□□□□□ -0.84
PRPF40A-202ENST00000410080 POLR2GP62487 172 aaKnown RBP eCLIP9.83□□□□□ -0.84
PRPF40A-202ENST00000410080 MPV17LQ2QL34 196 aa9.83□□□□□ -0.84
PRPF40A-202ENST00000410080 FAM106AQ4KMX7 169 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms